Paper · 2017 · Biologia Plantarum

RNA-seq analysis reveals a key role of brassinolide-regulated pathways in NaCl-stressed cotton

H. M. Shu; S. Q. Guo; Y. Y. Gong; et al.

11
claims
18
verbatim quotes
10
citations
2
research areas
—
Not open access

Abstract

Brassinolide (BL) alleviates salt injury in cotton seedlings; however, little is known about the molecular mechanisms of this response. In this study, digital gene expression analysis was performed to better understand the regulatory pathways of BL in NaCl-stressed cotton (Gossypium hirsutum L.). Compared with control plants (CK), a total of 1 162 and 7 659 differentially expressed genes (DEGs) were detected in the leaves and roots of NaCl-treated plants, respectively. Most of the DEGs in NaCl-treated plants, compared to CK, were regulated by BL. Moreover, expression patterns of DEGs in BL+NaCl treated plants were similar to those in CK plants; however, the responses of DEGs in the leaves and roots of NaCl-treated plants to BL differed. In the roots, BL-regulated DEGs were involved in protein biosynthesis, whereas in the leaves, BL promoted photosynthesis in NaCl-stressed cotton. BL treatment also significantly increased the overall biomass, chlorophyll a + b content in leaves, and the protein content in roots in NaCl-stressed cotton. The downregulation of stress-responsive genes in BL+NaCl-stressed leaves was also found. These results suggest that BL can alleviate NaCl injury in cotton plants.

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Claims 11

Observationobservedoriginal resultmeasured

Claim · model-written summary

NaCl treatment yielded 1 162 leaf DEGs relative to controls.

Organ / stage
leavese0
Treatment
NaCl-treatede0
Outcome
differentially expressed genes (DEGs)e0
Value
1 162e0
Comparator
control plants (CK)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Compared with control plants (CK), a total of 1 162 and 7 659 differentially expressed genes (DEGs) were detected in the leaves and roots of NaCl-treated plants, respectively”

✓ located verbatim in the source · abstract, characters 298–472 · show in text ↑
t0

“cotton”

✓ located verbatim in the source · title, characters 88–94 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

NaCl treatment yielded 7 659 root DEGs relative to controls.

Organ / stage
rootse0
Treatment
NaCl-treatede0
Outcome
differentially expressed genes (DEGs)e0
Value
7 659e0
Comparator
control plants (CK)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Compared with control plants (CK), a total of 1 162 and 7 659 differentially expressed genes (DEGs) were detected in the leaves and roots of NaCl-treated plants, respectively”

✓ located verbatim in the source · abstract, characters 298–472 · show in text ↑
t0

“cotton”

✓ located verbatim in the source · title, characters 88–94 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

BL regulated most NaCl responsive DEGs.

Treatment
BLe0
Outcome
DEGs in NaCl-treated plantse0
Comparator
CKe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Most of the DEGs in NaCl-treated plants, compared to CK, were regulated by BL”

✓ located verbatim in the source · abstract, characters 474–551 · show in text ↑
t0

“cotton”

✓ located verbatim in the source · title, characters 88–94 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

BL plus NaCl DEGs had expression patterns similar to controls.

Treatment
BL+NaCle0
Outcome
expression patterns of DEGse0
Comparator
CK plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“expression patterns of DEGs in BL+NaCl treated plants were similar to those in CK plants”

✓ located verbatim in the source · abstract, characters 563–651 · show in text ↑
t0

“cotton”

✓ located verbatim in the source · title, characters 88–94 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Leaves and roots differed in their DEG responses to BL under NaCl.

Organ / stage
leaves and rootse0
Treatment
BLe0
Outcome
responses of DEGse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the responses of DEGs in the leaves and roots of NaCl-treated plants to BL differed”

✓ located verbatim in the source · abstract, characters 662–745 · show in text ↑
t0

“cotton”

✓ located verbatim in the source · title, characters 88–94 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

BL regulated root DEGs involved in protein biosynthesis.

Organ / stage
rootse0
Treatment
BLe0
Outcome
DEGs were involved in protein biosynthesise0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In the roots, BL-regulated DEGs were involved in protein biosynthesis”

✓ located verbatim in the source · abstract, characters 747–816 · show in text ↑
t0

“cotton”

✓ located verbatim in the source · title, characters 88–94 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

BL promoted photosynthesis in NaCl stressed cotton leaves.

Organ / stage
leavese0
Treatment
BLe0
Outcome
photosynthesise0
Direction
promotede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“in the leaves, BL promoted photosynthesis in NaCl-stressed cotton”

✓ located verbatim in the source · abstract, characters 826–891 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

BL significantly increased biomass in salt stressed cotton.

Treatment
BL treatmente0
Outcome
overall biomasse0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“BL treatment also significantly increased the overall biomass, chlorophyll a + b content in leaves, and the protein content in roots in NaCl-stressed cotton”

✓ located verbatim in the source · abstract, characters 893–1049 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

BL significantly increased leaf chlorophyll a + b in salt stressed cotton.

Organ / stage
leavese0
Treatment
BL treatmente0
Outcome
chlorophyll a + b contente0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“BL treatment also significantly increased the overall biomass, chlorophyll a + b content in leaves, and the protein content in roots in NaCl-stressed cotton”

✓ located verbatim in the source · abstract, characters 893–1049 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

BL significantly increased root protein content in salt stressed cotton.

Organ / stage
rootse0
Treatment
BL treatmente0
Outcome
protein contente0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“BL treatment also significantly increased the overall biomass, chlorophyll a + b content in leaves, and the protein content in roots in NaCl-stressed cotton”

✓ located verbatim in the source · abstract, characters 893–1049 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Stress responsive genes were downregulated in BL plus NaCl leaves.

Organ / stage
leavese0
Treatment
BL+NaCle0
Outcome
stress-responsive genese0
Direction
downregulatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The downregulation of stress-responsive genes in BL+NaCl-stressed leaves was also found”

✓ located verbatim in the source · abstract, characters 1051–1138 · show in text ↑
t0

“cotton”

✓ located verbatim in the source · title, characters 88–94 · show in text ↑

brassinolide · growth · Gossypium hirsutum (cotton)Positive and negative results

4 papers: 3 positive, 1 negative or no effect

2 papers in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. no effect
  3. positive
See all 4 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.