Paper · 2013 · Genetics and Molecular Biology

Genetic and epigenetic effects of salinity on in vitro growth of barley

Aykut Demirkiran; Sevgi Marakli; Aslihan Temel; et al.

7
claims
20
verbatim quotes
31
citations
2
research areas
✓
Open access · cc-by

Abstract

Morphological, physiological and molecular changes were investigated in in vitro salt-stressed barley (Hordeum vulgare L. cv. Tokak). Mature embryos were cultured in Murashige and Skoog medium containing 0 (control), 50 and 100 mM NaCl for 20 days. Both concentrations inhibited shoot growth, decreased fresh weight and protein content, and increased SOD (EC 1.15.1.1) activity in a dose-dependent manner. The lower concentration increased root growth. Salinity caused nucleotide variations in roots, but did not affect shoot DNAs. The higher concentration caused methylation changes, mainly hypermethylation in shoots. This is the first study on genetic and epigenetic effects of salinity in barley.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 7

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Salinity inhibits shoot growth of in vitro barley cv. Tokak at both 50 and 100 mM NaCl.

Material
Tokake0
Organ / stage
shoote2
Treatment
NaCle1
Outcome
shoot growthe2
Direction
inhibitede2
Comparator
0 (control)e1
Setting
in vitrot0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Genetic and epigenetic effects of salinity on in vitro growth of barley”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
e0

“Morphological, physiological and molecular changes were investigated in in vitro salt-stressed barley (Hordeum vulgare L. cv. Tokak)”

✓ located verbatim in the source · abstract, characters 0–132 · show in text ↑
e1

“Mature embryos were cultured in Murashige and Skoog medium containing 0 (control), 50 and 100 mM NaCl for 20 days”

✓ located verbatim in the source · abstract, characters 134–247 · show in text ↑
e2

“Both concentrations inhibited shoot growth, decreased fresh weight and protein content, and increased SOD (EC 1.15.1.1) activity in a dose-dependent manner”

✓ located verbatim in the source · abstract, characters 249–404 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Salinity decreases fresh weight and protein content of in vitro barley at both NaCl concentrations.

Treatment
NaCle1
Outcome
fresh weight and protein contente2
Direction
decreasede2
Comparator
0 (control)e1
Setting
in vitrot0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Genetic and epigenetic effects of salinity on in vitro growth of barley”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
e1

“Mature embryos were cultured in Murashige and Skoog medium containing 0 (control), 50 and 100 mM NaCl for 20 days”

✓ located verbatim in the source · abstract, characters 134–247 · show in text ↑
e2

“Both concentrations inhibited shoot growth, decreased fresh weight and protein content, and increased SOD (EC 1.15.1.1) activity in a dose-dependent manner”

✓ located verbatim in the source · abstract, characters 249–404 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Salinity increases SOD (EC 1.15.1.1) activity of in vitro barley in a dose-dependent manner.

Treatment
NaCle1
Gene
SOD (EC 1.15.1.1)e2
Outcome
SOD (EC 1.15.1.1) activitye2
Direction
increasede2
Qualifier
in a dose-dependent mannere2
Comparator
0 (control)e1
Setting
in vitrot0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Genetic and epigenetic effects of salinity on in vitro growth of barley”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
e1

“Mature embryos were cultured in Murashige and Skoog medium containing 0 (control), 50 and 100 mM NaCl for 20 days”

✓ located verbatim in the source · abstract, characters 134–247 · show in text ↑
e2

“Both concentrations inhibited shoot growth, decreased fresh weight and protein content, and increased SOD (EC 1.15.1.1) activity in a dose-dependent manner”

✓ located verbatim in the source · abstract, characters 249–404 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The lower NaCl concentration increases root growth of in vitro barley.

Treatment
NaCle1
Outcome
root growthe3
Direction
increasede3
Qualifier
The lower concentratione3
Comparator
0 (control)e1
Setting
in vitrot0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Genetic and epigenetic effects of salinity on in vitro growth of barley”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
e1

“Mature embryos were cultured in Murashige and Skoog medium containing 0 (control), 50 and 100 mM NaCl for 20 days”

✓ located verbatim in the source · abstract, characters 134–247 · show in text ↑
e3

“The lower concentration increased root growth”

✓ located verbatim in the source · abstract, characters 406–451 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Salinity causes nucleotide variations in barley roots.

Treatment
Salinitye4
Outcome
nucleotide variations in rootse4

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Genetic and epigenetic effects of salinity on in vitro growth of barley”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
e4

“Salinity caused nucleotide variations in roots, but did not affect shoot DNAs”

✓ located verbatim in the source · abstract, characters 453–530 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Salinity does not affect nucleotide sequences of barley shoot DNA.

Organ / stage
shoote4
Treatment
Salinitye4
Outcome
shoot DNAse4
Direction
did not affecte4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Genetic and epigenetic effects of salinity on in vitro growth of barley”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
e4

“Salinity caused nucleotide variations in roots, but did not affect shoot DNAs”

✓ located verbatim in the source · abstract, characters 453–530 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

The higher NaCl concentration causes methylation changes, mainly hypermethylation in barley shoots.

Treatment
NaCle1
Outcome
methylation changese5
Qualifier
mainly hypermethylation in shootse5
Comparator
0 (control)e1

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Genetic and epigenetic effects of salinity on in vitro growth of barley”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
e1

“Mature embryos were cultured in Murashige and Skoog medium containing 0 (control), 50 and 100 mM NaCl for 20 days”

✓ located verbatim in the source · abstract, characters 134–247 · show in text ↑
e5

“The higher concentration caused methylation changes, mainly hypermethylation in shoots”

✓ located verbatim in the source · abstract, characters 532–618 · show in text ↑

sodium chloride · quality: protein · Hordeum vulgare (barley)Results differ

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. positive
See all 2 papers →

sodium chloride · growth · Hordeum vulgare (barley)Results differ

47 papers: 6 positive, 41 negative or no effect

5 papers in the same direction as this paper · 41 in the opposite direction

  1. negative
  2. negative
  3. negative

43 papers more in this group

See all 47 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.