Paper · 2014 · Journal of Experimental Botany

miR168 influences phase transition, leaf epinasty, and fruit development via SlAGO1s in tomato

Zhiqiang Xian; Wei Huang; Yingwu Yang; et al.

8
claims
12
verbatim quotes
80
citations
2
research areas
✓
Open access

Abstract

In Arabidopsis thaliana, Argonaute1 (AGO1) interacts with miR168 to modulate the small RNA regulatory pathway. However, the underlying mechanism of regulation and relationship between AGO1 and miR168 is poorly understood in the cash crop Solanum lycopersicum (tomato). We previously found that SlAGO1A and SlAGO1B were cleaved by miR168 in tomato. In this study, we show that SlAGO1A and SlAGO1B accumulate in miR168-sponge transgenic plants, and that expression of miR168-resistant SlAGO1A (4m-SlAGO1A) and SlAGO1B (4m-SlAGO1B) in tomato results in a series of defects affecting growth rate, floral timing, leaves, and fruit. Accumulation of miR156 was found when 4m-SlAGO1A was at an early developmental stage compared to the wild type and original SlAGO1A transgenic plants, and miR172 was highly expressed in adult 4m-SlAGO1A compared to the controls. In addition, the expression of multiple small RNAs was altered in 4m-SlAGO1A. Taken together, our data provide novel insights into the interaction between SlAGO1s and miR168 in determining growth rate, phase change, leaf epinasty, fruit initiation and expansion, and other developmental processes in tomato.

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Claims 8

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

SlAGO1A and SlAGO1B accumulate in miR168-sponge transgenic tomato plants.

Treatment
miR168-sponge transgenic plantse1
Gene
SlAGO1Ae1
Outcome
SlAGO1A and SlAGO1Be1
Direction
accumulatee1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“miR168 influences phase transition, leaf epinasty, and fruit development via SlAGO1s in tomato”

✓ located verbatim in the source · title, characters 0–94 · show in text ↑
e1

“SlAGO1A and SlAGO1B accumulate in miR168-sponge transgenic plants”

✓ located verbatim in the source · abstract, characters 376–441 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Expression of miR168-resistant SlAGO1 in tomato causes defects in growth rate.

Treatment
expression of miR168-resistant SlAGO1A (4m-SlAGO1A)e2
Outcome
growth ratee2
Direction
defectse2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e2

“expression of miR168-resistant SlAGO1A (4m-SlAGO1A) and SlAGO1B (4m-SlAGO1B) in tomato results in a series of defects affecting growth rate, floral timing, leaves, and fruit”

✓ located verbatim in the source · abstract, characters 452–625 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Expression of miR168-resistant SlAGO1 in tomato causes defects in floral timing.

Treatment
expression of miR168-resistant SlAGO1A (4m-SlAGO1A)e2
Outcome
floral timinge2
Direction
defectse2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e2

“expression of miR168-resistant SlAGO1A (4m-SlAGO1A) and SlAGO1B (4m-SlAGO1B) in tomato results in a series of defects affecting growth rate, floral timing, leaves, and fruit”

✓ located verbatim in the source · abstract, characters 452–625 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Expression of miR168-resistant SlAGO1 in tomato causes defects in leaves.

Treatment
expression of miR168-resistant SlAGO1A (4m-SlAGO1A)e2
Outcome
leavese2
Direction
defectse2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e2

“expression of miR168-resistant SlAGO1A (4m-SlAGO1A) and SlAGO1B (4m-SlAGO1B) in tomato results in a series of defects affecting growth rate, floral timing, leaves, and fruit”

✓ located verbatim in the source · abstract, characters 452–625 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Expression of miR168-resistant SlAGO1 in tomato causes defects in fruit.

Treatment
expression of miR168-resistant SlAGO1A (4m-SlAGO1A)e2
Outcome
fruite2
Direction
defectse2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e2

“expression of miR168-resistant SlAGO1A (4m-SlAGO1A) and SlAGO1B (4m-SlAGO1B) in tomato results in a series of defects affecting growth rate, floral timing, leaves, and fruit”

✓ located verbatim in the source · abstract, characters 452–625 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

miR156 accumulated at an early developmental stage in 4m-SlAGO1A tomato compared with wild type and original SlAGO1A transgenic plants.

Organ / stage
early developmental stagee3
Treatment
4m-SlAGO1Ae3
Outcome
miR156e3
Direction
Accumulatione3
Comparator
wild type and original SlAGO1A transgenic plantse3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e2

“expression of miR168-resistant SlAGO1A (4m-SlAGO1A) and SlAGO1B (4m-SlAGO1B) in tomato results in a series of defects affecting growth rate, floral timing, leaves, and fruit”

✓ located verbatim in the source · abstract, characters 452–625 · show in text ↑
e3

“Accumulation of miR156 was found when 4m-SlAGO1A was at an early developmental stage compared to the wild type and original SlAGO1A transgenic plants”

✓ located verbatim in the source · abstract, characters 627–776 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

miR172 was highly expressed in adult 4m-SlAGO1A tomato compared with controls.

Organ / stage
adulte4
Treatment
4m-SlAGO1Ae4
Outcome
miR172e4
Direction
highly expressede4
Comparator
controlse4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e2

“expression of miR168-resistant SlAGO1A (4m-SlAGO1A) and SlAGO1B (4m-SlAGO1B) in tomato results in a series of defects affecting growth rate, floral timing, leaves, and fruit”

✓ located verbatim in the source · abstract, characters 452–625 · show in text ↑
e4

“miR172 was highly expressed in adult 4m-SlAGO1A compared to the controls”

✓ located verbatim in the source · abstract, characters 782–854 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

The expression of multiple small RNAs was altered in 4m-SlAGO1A tomato.

Treatment
4m-SlAGO1Ae5
Outcome
expression of multiple small RNAse5
Direction
alterede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e2

“expression of miR168-resistant SlAGO1A (4m-SlAGO1A) and SlAGO1B (4m-SlAGO1B) in tomato results in a series of defects affecting growth rate, floral timing, leaves, and fruit”

✓ located verbatim in the source · abstract, characters 452–625 · show in text ↑
e5

“the expression of multiple small RNAs was altered in 4m-SlAGO1A”

✓ located verbatim in the source · abstract, characters 869–932 · show in text ↑

transgenic · yield · Solanum lycopersicum (tomato)Positive and negative results

16 papers: 9 positive, 7 negative or no effect

6 papers in the same direction as this paper · 9 in the opposite direction

  1. positive
  2. positive
  3. positive

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transgenic · growth · Solanum lycopersicum (tomato)Positive and negative results

27 papers: 16 positive, 11 negative or no effect

10 papers in the same direction as this paper · 16 in the opposite direction

  1. positive
  2. positive
  3. positive

23 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.