Paper · 2015 · Plant Pathology

Development of a grower‐conducted inoculum detection assay for management of grape powdery mildew

L. D. Thiessen; J. A. Keune; T. M. Neill; et al.

8
claims
16
verbatim quotes
112
citations
3
research areas
✓
Open access

Abstract

Management of grape powdery mildew ( Erysiphe necator ) and other polycyclic diseases often relies on calendar‐based pesticide application schedules that assume the presence of inoculum. An inexpensive, loop‐mediated isothermal amplification ( LAMP ) assay was designed to quickly detect airborne inoculum of E. necator to determine when to initiate a fungicide application programme. Field efficacy was tested in 2010 and 2011 in several commercial and research vineyards in the Willamette Valley of Oregon from pre‐bud break to véraison. In each vineyard, three impaction spore traps were placed adjacent to the trunk. One trap was maintained and used by the grower to conduct the LAMP assay (G‐ LAMP ) on‐site and the other two traps were used for laboratory‐conducted LAMP (L‐ LAMP ) and quantitative PCR assay ( qPCR ). Using the qPCR as a gold standard, L‐ LAMP was comparable with qPCR in both years, and G‐ LAMP was comparable to qPCR in 2011. Latent class analysis indicated that qPCR had a true positive proportion of 98% in 2010 and 89% in 2011 and true negative proportion of 96% in 2010 and 64% in 2011. An average of 3·3 fewer fungicide applications were used when they were initiated based on spore detection relative to the grower standard practice. There were no significant differences in berry or leaf incidence between plots with fungicides initiated at detection or grower standard practice plots, suggesting that growers using LAMP to initiate fungicide applications can use fewer fungicide applications to manage powdery mildew compared to standard practices.

Abstract from the paper’s OpenAlex record, shown for indexing and research. Copyright remains with the authors or the publisher. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 8

Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Laboratory LAMP was comparable with qPCR (gold standard) in both 2010 and 2011 for detecting airborne Erysiphe necator inoculum.

Taxon
grapet0
Outcome
comparablee0
Comparator
qPCRe0

Verbatim

t0

“grape”

✓ located verbatim in the source · title, characters 77–82 · show in text ↑
e0

“was comparable with qPCR in both years”

✓ located verbatim in the source · abstract, characters 868–906 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Grower-conducted on-site LAMP was comparable to qPCR in 2011.

Taxon
grapet0
Outcome
comparablee0
Qualifier
in 2011e0
Comparator
qPCRe0

Verbatim

t0

“grape”

✓ located verbatim in the source · title, characters 77–82 · show in text ↑
e0

“was comparable to qPCR in 2011”

✓ located verbatim in the source · abstract, characters 920–950 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Latent class analysis gave qPCR a true positive proportion of 98% in 2010.

Taxon
grapet0
Outcome
true positive proportione0
Value
98%e0

Verbatim

t0

“grape”

✓ located verbatim in the source · title, characters 77–82 · show in text ↑
e0

“true positive proportion of 98% in 2010”

✓ located verbatim in the source · abstract, characters 1000–1039 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Latent class analysis gave qPCR a true positive proportion of 89% in 2011.

Taxon
grapet0
Outcome
true positive proportione0
Value
89%e0

Verbatim

t0

“grape”

✓ located verbatim in the source · title, characters 77–82 · show in text ↑
e0

“true positive proportion of 98% in 2010 and 89% in 2011”

✓ located verbatim in the source · abstract, characters 1000–1055 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Latent class analysis gave qPCR a true negative proportion of 96% in 2010.

Taxon
grapet0
Outcome
true negative proportione0
Value
96%e0

Verbatim

t0

“grape”

✓ located verbatim in the source · title, characters 77–82 · show in text ↑
e0

“true negative proportion of 96% in 2010”

✓ located verbatim in the source · abstract, characters 1060–1099 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Latent class analysis gave qPCR a true negative proportion of 64% in 2011.

Taxon
grapet0
Outcome
true negative proportione0
Value
64%e0

Verbatim

t0

“grape”

✓ located verbatim in the source · title, characters 77–82 · show in text ↑
e0

“true negative proportion of 96% in 2010 and 64% in 2011”

✓ located verbatim in the source · abstract, characters 1060–1115 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Initiating fungicide applications based on spore detection used an average of 3.3 fewer applications than the grower standard practice.

Taxon
grapet0
Treatment
initiated based on spore detectione0
Outcome
fungicide applicationse0
Direction
fewere0
Value
3·3e0
Comparator
grower standard practicee0

Verbatim

t0

“grape”

✓ located verbatim in the source · title, characters 77–82 · show in text ↑
e0

“An average of 3·3 fewer fungicide applications were used when they were initiated based on spore detection relative to the grower standard practice”

✓ located verbatim in the source · abstract, characters 1117–1264 · show in text ↑
Intervention effectobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

There were no significant differences in berry or leaf powdery mildew incidence between plots with fungicides initiated at spore detection and grower standard practice plots.

Taxon
grapet0
Treatment
fungicides initiated at detectione0
Outcome
berry or leaf incidencee0
Direction
no significant differencese0
Comparator
grower standard practice plotse0

Verbatim

t0

“grape”

✓ located verbatim in the source · title, characters 77–82 · show in text ↑
e0

“no significant differences in berry or leaf incidence between plots with fungicides initiated at detection or grower standard practice plots”

✓ located verbatim in the source · abstract, characters 1277–1417 · show in text ↑

fungicide · disease · VitisPositive and negative results

26 papers: 22 positive, 4 negative or no effect

3 papers in the same direction as this paper · 22 reporting no difference from an alternative

  1. positive
  2. positive
  3. positive

22 papers more in this group

See all 26 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.