Paper · 2008 · The Plant Journal

VASCULAR‐RELATED NAC‐DOMAIN7 is involved in the differentiation of all types of xylem vessels in Arabidopsis roots and shoots

Masatoshi Yamaguchi; Minoru Kubo; Hiroo Fukuda; et al.

8
claims
13
verbatim quotes
365
citations
2
research areas
✓
Open access

Abstract

SUMMARY: The Arabidopsis thaliana NAC domain transcription factor, vascular-related NAC-DOMAIN7 (VND7), plays a pivotal role in regulating the differentiation of root protoxylem vessels. In order to understand the mechanisms underscoring the function of VND7 in vessel differentiation in more detail, we conducted extensive molecular analyses in yeast (Saccharomyces cerevisiae), Arabidopsis, and Nicotiana tabacum L. cv. Bright Yellow 2 (tobacco BY-2) cells. The transcriptional activation activity of VND7 was confirmed in yeast and Arabidopsis, and the C-terminal region was shown to be required for VND7 transcriptional activation. Expression of the C-terminus-truncated VND7 protein under the control of the native VND7 promoter resulted in inhibition of the normal development of metaxylem vessels in roots and vessels in aerial organs, as well as protoxylem vessels in roots. The expression pattern of VND7 overlapped that of VND2 to VND5 in most of the differentiating vessels. Furthermore, a yeast two-hybrid assay revealed the ability of VND7 to form homodimers and heterodimers with other VND proteins via their N-termini, which include the NAC domain. The heterologous expression of VND7 in tobacco BY-2 cells demonstrated that the stability of VND7 could be regulated by proteasome-mediated degradation. Together these data suggest that VND7 regulates the differentiation of all types of vessels in roots and shoots, possibly in cooperation with VND2 to VND5 and other regulatory proteins.

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Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

VND7 transcriptional activation was confirmed in Arabidopsis and yeast.

Taxon
ArabidopsisArabidopsise0
Gene
VND7e0
Outcome
transcriptional activation activity of VND7 was confirmede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The transcriptional activation activity of VND7 was confirmed in yeast and Arabidopsis, and the C-terminal region was shown to be required for VND7 transcriptional activation.”

✓ located verbatim in the source · abstract, characters 460–635 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

The C-terminal region was required for VND7 transcriptional activation.

Taxon
ArabidopsisArabidopsise0
Gene
VND7e0
Outcome
VND7 transcriptional activatione0
Qualifier
C-terminal region was shown to be requirede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The transcriptional activation activity of VND7 was confirmed in yeast and Arabidopsis, and the C-terminal region was shown to be required for VND7 transcriptional activation.”

✓ located verbatim in the source · abstract, characters 460–635 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Truncated VND7 inhibited development of root metaxylem, root protoxylem and aerial vessels.

Taxon
ArabidopsisArabidopsist0
Treatment
Expression of the C-terminus-truncated VND7 proteine0
Gene
VND7e0
Outcome
normal development of metaxylem vessels in roots and vessels in aerial organs, as well as protoxylem vessels in rootse0
Direction
inhibitione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Expression of the C-terminus-truncated VND7 protein under the control of the native VND7 promoter resulted in inhibition of the normal development of metaxylem vessels in roots and vessels in aerial organs, as well as protoxylem vessels in roots.”

✓ located verbatim in the source · abstract, characters 636–882 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 97–108 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

VND7 expression overlapped VND2 to VND5 in differentiating vessels.

Taxon
ArabidopsisArabidopsist0
Gene
VND7e0
Outcome
expression pattern of VND7 overlapped that of VND2 to VND5e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The expression pattern of VND7 overlapped that of VND2 to VND5 in most of the differentiating vessels.”

✓ located verbatim in the source · abstract, characters 883–985 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 97–108 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

VND7 formed homodimers through its N terminus.

Taxon
ArabidopsisArabidopsist0
Gene
VND7e0
Outcome
form homodimerse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Furthermore, a yeast two-hybrid assay revealed the ability of VND7 to form homodimers and heterodimers with other VND proteins via their N-termini, which include the NAC domain.”

✓ located verbatim in the source · abstract, characters 986–1163 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 97–108 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

VND7 formed heterodimers with other VND proteins through their N termini.

Taxon
ArabidopsisArabidopsist0
Gene
VND7e0
Outcome
heterodimers with other VND proteinse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Furthermore, a yeast two-hybrid assay revealed the ability of VND7 to form homodimers and heterodimers with other VND proteins via their N-termini, which include the NAC domain.”

✓ located verbatim in the source · abstract, characters 986–1163 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 97–108 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

In tobacco BY-2 cells, VND7 stability could be regulated by proteasome-mediated degradation.

Material
BY-2e0
Gene
VND7e0
Outcome
stability of VND7e0
Qualifier
proteasome-mediated degradatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“The heterologous expression of VND7 in tobacco BY-2 cells demonstrated that the stability of VND7 could be regulated by proteasome-mediated degradation.”

✓ located verbatim in the source · abstract, characters 1164–1316 · show in text ↑
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

VND7 may regulate all vessel types in roots and shoots with VND2 to VND5.

Taxon
ArabidopsisArabidopsist0
Gene
VND7e0
Outcome
differentiation of all types of vessels in roots and shootse0
Qualifier
possibly in cooperation with VND2 to VND5 and other regulatory proteinse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Together these data suggest that VND7 regulates the differentiation of all types of vessels in roots and shoots, possibly in cooperation with VND2 to VND5 and other regulatory proteins.”

✓ located verbatim in the source · abstract, characters 1317–1502 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 97–108 · show in text ↑

transgenic · growth · ArabidopsisPositive and negative results

85 papers: 35 positive, 50 negative or no effect

49 papers in the same direction as this paper · 35 in the opposite direction

  1. negative
  2. positive
  3. positive

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