Paper · 2013 · New Phytologist

Soybean NDR1‐like proteins bind pathogen effectors and regulate resistance signaling

Devarshi Selote; M. B. Shine; Guillaume P. Robin; et al.

7
claims
12
verbatim quotes
39
citations
2
research areas
—
Not open access

Abstract

Nonrace specific disease resistance 1 (NDR1) is a conserved downstream regulator of resistance (R) protein-derived signaling. We identified two NDR1-like sequences (GmNDR1a, b) from soybean, and investigated their roles in R-mediated resistance and pathogen effector detection. Silencing GmNDR1a and b in soybean shows that these genes are required for resistance derived from the Rpg1-b, Rpg3, and Rpg4 loci, against Pseudomonas syringae (Psg) expressing avrB, avrB2 and avrD1, respectively. Immunoprecipitation assays show that the GmNDR1 proteins interact with the AvrB2 and AvrD1 Psg effectors. This correlates with the enhanced virulence of Psg avrB2 and Psg avrD1 in GmNDR1-silenced rpg3 rpg4 plants, even though these strains are not normally more virulent on plants lacking cognate R loci. The GmNDR1 proteins interact with GmRIN4 proteins, but not with AvrB, or its cognate R protein Rpg1-b. However, the GmNDR1 proteins promote AvrB-independent activation of Rpg1-b when coexpressed with a phosphomimic derivative of GmRIN4b. The role of GmNDR1 proteins in Rpg1-b activation, their direct interactions with AvrB2/AvrD1, and a putative role in the virulence activities of Avr effectors, provides the first experimental evidence in support of the proposed role for NDR1 in transducing extracellular pathogen-derived signals.

Abstract from the paper’s OpenAlex record, shown for indexing and research. Copyright remains with the authors or the publisher. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 7

Observationobservedoriginal resultmeasured

Claim · model-written summary

Two soybean NDR1-like sequences, GmNDR1a and b, were identified.

Taxon
soybeanGlycine maxe0
Gene
GmNDR1a, be0
Outcome
two NDR1-like sequencese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“We identified two NDR1-like sequences (GmNDR1a, b) from soybean”

✓ located verbatim in the source · abstract, characters 126–189 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing GmNDR1a and b showed their requirement for Rpg1-b, Rpg3 and Rpg4 mediated resistance to Psg strains.

Taxon
soybeanGlycine maxe0
Treatment
Silencing GmNDR1a and be0
Interactor
Pseudomonas syringaePseudomonas syringaee0pathogen
Gene
GmNDR1a and be0
Outcome
resistance derived from the Rpg1-b, Rpg3, and Rpg4 locie0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Pseudomonas syringae
Pseudomonas syringae · InteractorHoward F. Schwartz · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Silencing GmNDR1a and b in soybean shows that these genes are required for resistance derived from the Rpg1-b, Rpg3, and Rpg4 loci, against Pseudomonas syringae (Psg) expressing avrB, avrB2 and avrD1, respectively.”

✓ located verbatim in the source · abstract, characters 278–492 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

GmNDR1 proteins interacted with AvrB2 and AvrD1 effectors.

Taxon
soybeanGlycine maxt0
Interactor
Psge0pathogen
Gene
GmNDR1 proteinse0
Outcome
interact with the AvrB2 and AvrD1 Psg effectorse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“the GmNDR1 proteins interact with the AvrB2 and AvrD1 Psg effectors.”

✓ located verbatim in the source · abstract, characters 530–598 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 0–7 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Psg avrB2 and avrD1 had enhanced virulence in GmNDR1-silenced rpg3 rpg4 plants.

Taxon
soybeanGlycine maxt0
Treatment
GmNDR1-silenced rpg3 rpg4 plantse0
Interactor
Psge0pathogen
Outcome
virulence of Psg avrB2 and Psg avrD1e0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“enhanced virulence of Psg avrB2 and Psg avrD1 in GmNDR1-silenced rpg3 rpg4 plants”

✓ located verbatim in the source · abstract, characters 624–705 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 0–7 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

GmNDR1 proteins interacted with GmRIN4 proteins.

Taxon
soybeanGlycine maxt0
Gene
GmNDR1 proteinse0
Outcome
interact with GmRIN4 proteinse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“The GmNDR1 proteins interact with GmRIN4 proteins”

✓ located verbatim in the source · abstract, characters 798–847 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 0–7 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

GmNDR1 proteins did not interact with AvrB or Rpg1-b.

Taxon
soybeanGlycine maxt0
Gene
Rpg1-be0
Outcome
not with AvrB, or its cognate R protein Rpg1-be0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“but not with AvrB, or its cognate R protein Rpg1-b.”

✓ located verbatim in the source · abstract, characters 849–900 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 0–7 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

GmNDR1 proteins promoted AvrB-independent Rpg1-b activation with phosphomimic GmRIN4b.

Taxon
soybeanGlycine maxt0
Treatment
coexpressed with a phosphomimic derivative of GmRIN4be0
Gene
GmNDR1 proteinse0
Outcome
activation of Rpg1-be0
Direction
promotee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“the GmNDR1 proteins promote AvrB-independent activation of Rpg1-b when coexpressed with a phosphomimic derivative of GmRIN4b.”

✓ located verbatim in the source · abstract, characters 910–1035 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 0–7 · show in text ↑

loss of function · Pseudomonas syringae · Glycine max (soybean)Results agree

2 papers: 0 positive, 2 negative or no effect

1 paper in the same direction as this paper

  1. negative
See all 2 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.