Paper · 1996 · The Plant Journal

Metabolic regulation of asparagine synthetase gene expression in maize (Zea mays L.) root tips

Christian Chevalier; Emmanuelle Bourgeois; Daniel Just; et al.

9
claims
16
verbatim quotes
121
citations
2
research areas
—
Not open access

Abstract

Differential hybridization of a cDNA library constructed with poly(A)+ mRNA from 24 h starved maize (Zea mays L.) root tips, resulted in the isolation of a cDNA (called pZSS1) that was highly induced during glucose deprivation. The nucleotide sequence analysis of the full-length cDNA allowed its identification by comparison with sequence data bases. The 586 amino acid sequence encoded by pZSS1 was shown to be about 60% identical to sequences of asparagine synthetases (EC 6.3.5.4) from Asparagus officinalis, Pisum sativum, Arabidopsis thaliana and Brassica oleracea. Southern blot analysis of maize genomic DNA showed that asparagine synthetase may be encoded by at least two genes. The use of a specific probe for the 3' untranslated region of pZSS1 in Northern blot experiments, revealed that the isolated AS gene was essentially expressed in roots of maize seedlings. Time course analysis revealed that maximal expression of the gene corresponding to pZSS1 occurs between 18 and 24 h after the onset of the starvation treatment. The steady-state levels of transcripts in maize root tips were found to change under various incubation conditions. Exogenous supply of metabolizable sugars downregulated the gene expression, while carbohydrate deprivation or feeding with non-metabolizable sugars resulted in the induction of gene expression. In addition to carbohydrate deprivation, the effects of nitrogen metabolite supply and stress conditions indicate that gene expression might be under metabolic control in maize root tips. The intracellular nitrogen to carbon ratio might be an important factor for the regulation of asparagine synthetase gene expression.

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Claims 9

Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

A cDNA called pZSS1 was highly induced by glucose deprivation.

Taxon
maizeZea mayst0
Gene
pZSS1e0
Outcome
induced during glucose deprivatione0
Direction
highly inducede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“a cDNA (called pZSS1) that was highly induced during glucose deprivation”

✓ located verbatim in the source · abstract, characters 154–226 · show in text ↑
t0

“maize”

✓ located verbatim in the source · title, characters 65–70 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The pZSS1 encoded sequence was about 60% identical to asparagine synthetases from four named plants.

Taxon
maizeZea mayst0
Gene
pZSS1e0
Outcome
identical to sequences of asparagine synthetasese0
Value
about 60%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The 586 amino acid sequence encoded by pZSS1 was shown to be about 60% identical to sequences of asparagine synthetases (EC 6.3.5.4) from Asparagus officinalis, Pisum sativum, Arabidopsis thaliana and Brassica oleracea.”

✓ located verbatim in the source · abstract, characters 352–571 · show in text ↑
t0

“maize”

✓ located verbatim in the source · title, characters 65–70 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Maize asparagine synthetase may be encoded by at least two genes.

Taxon
maizeZea mayst0
Gene
asparagine synthetasee0
Outcome
encoded by at least two genese0
Value
at least two genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“asparagine synthetase may be encoded by at least two genes”

✓ located verbatim in the source · abstract, characters 628–686 · show in text ↑
t0

“maize”

✓ located verbatim in the source · title, characters 65–70 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The isolated AS gene was expressed mainly in maize seedling roots.

Taxon
maizeZea mayse0
Organ / stage
rootse0
Gene
AS genee0
Outcome
essentially expressed in rootse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the isolated AS gene was essentially expressed in roots of maize seedlings”

✓ located verbatim in the source · abstract, characters 800–874 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

pZSS1 expression peaked 18 to 24 hours after starvation began.

Taxon
maizeZea mayst0
Treatment
starvation treatmente0
Gene
pZSS1e0
Outcome
maximal expressione0
Value
between 18 and 24 he0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“maximal expression of the gene corresponding to pZSS1 occurs between 18 and 24 h after the onset of the starvation treatment”

✓ located verbatim in the source · abstract, characters 911–1035 · show in text ↑
t0

“maize”

✓ located verbatim in the source · title, characters 65–70 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Metabolizable sugars downregulated gene expression.

Taxon
maizeZea mayst0
Treatment
Exogenous supply of metabolizable sugarse0
Outcome
gene expressione0
Direction
downregulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Exogenous supply of metabolizable sugars downregulated the gene expression”

✓ located verbatim in the source · abstract, characters 1153–1227 · show in text ↑
t0

“maize”

✓ located verbatim in the source · title, characters 65–70 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Carbohydrate deprivation induced gene expression.

Taxon
maizeZea mayst0
Treatment
carbohydrate deprivatione0
Outcome
gene expressione0
Direction
inductione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“carbohydrate deprivation or feeding with non-metabolizable sugars resulted in the induction of gene expression”

✓ located verbatim in the source · abstract, characters 1235–1345 · show in text ↑
t0

“maize”

✓ located verbatim in the source · title, characters 65–70 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Nonmetabolizable sugar feeding induced gene expression.

Taxon
maizeZea mayst0
Treatment
feeding with non-metabolizable sugarse0
Outcome
gene expressione0
Direction
inductione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“carbohydrate deprivation or feeding with non-metabolizable sugars resulted in the induction of gene expression”

✓ located verbatim in the source · abstract, characters 1235–1345 · show in text ↑
t0

“maize”

✓ located verbatim in the source · title, characters 65–70 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Nitrogen metabolite supply and stress conditions indicate metabolic control of gene expression.

Taxon
maizeZea mayse0
Treatment
nitrogen metabolite supply and stress conditionse0
Outcome
gene expressione0
Qualifier
might be under metabolic controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the effects of nitrogen metabolite supply and stress conditions indicate that gene expression might be under metabolic control in maize root tips”

✓ located verbatim in the source · abstract, characters 1388–1533 · show in text ↑

carbohydrate · molecular: expression · Zea mays (maize)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

infection · molecular: expression · Zea mays (maize)Positive and negative results

26 papers: 23 positive, 3 negative or no effect

22 papers in the same direction as this paper · 3 in the opposite direction

  1. negative
  2. negative
  3. negative

22 papers more in this group

See all 26 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.