Paper · 2007 · PLANT PHYSIOLOGY

The RiceYABBY1Gene Is Involved in the Feedback Regulation of Gibberellin Metabolism

Mingqiu Dai; Yu Zhao; Qian Ma; et al.

14
claims
28
verbatim quotes
169
citations
3
research areas
✓
Open access

Abstract

Gibberellin (GA) biosynthesis is regulated by feedback control providing a mechanism for GA homeostasis in plants. However, regulatory elements involved in the feedback control are not known. In this report, we show that a rice (Oryza sativa) YABBY1 (YAB1) gene had a similar expression pattern as key rice GA biosynthetic genes GA3ox2 and GA20ox2. Overexpression of YAB1 in transgenic rice resulted in a semidwarf phenotype that could be fully rescued by applied GA. Quantification of the endogenous GA content revealed increases of GA(20) and decreases of GA(1) levels in the overexpression plants, in which the transcripts of the biosynthetic gene GA3ox2 were decreased. Cosuppression of YAB1 in transgenic plants induced expression of GA3ox2. The repression of GA3ox2 could be obtained upon treatment by dexamethasone of transgenic plants expressing a YAB1-glucocorticoid receptor fusion. Importantly, we show that YAB1 bound to a GA-responsive element within the GA3ox2 promoter. In addition, the expression of YAB1 was deregulated in GA biosynthesis and signaling mutants and could be either transiently induced by GA or repressed by a GA inhibitor. Finally, either overexpression or cosuppression of YAB1 impaired GA-mediated repression of GA3ox2. These data together suggest that YAB1 is involved in the feedback regulation of GA biosynthesis in rice.

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Claims 14

Associationobservedoriginal resultmeasured

Claim · model-written summary

YAB1 expression resembled expression of GA3ox2 and GA20ox2.

Gene
YABBY1 (YAB1)e0
Outcome
similar expression patterne0
Comparator
GA3ox2 and GA20ox2e0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“a rice (Oryza sativa) YABBY1 (YAB1) gene had a similar expression pattern as key rice GA biosynthetic genes GA3ox2 and GA20ox2”

✓ located verbatim in the source · abstract, characters 221–347 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

YAB1 overexpression caused a semidwarf phenotype.

Treatment
Overexpression of YAB1e0
Gene
YAB1e0
Outcome
semidwarf phenotypee0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Overexpression of YAB1 in transgenic rice resulted in a semidwarf phenotype”

✓ located verbatim in the source · abstract, characters 349–424 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Applied GA fully rescued the YAB1 overexpression semidwarf phenotype.

Treatment
applied GAe0
Gene
YAB1e0
Outcome
semidwarf phenotypee0
Direction
fully rescuede0
Comparator
Overexpression of YAB1e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Overexpression of YAB1 in transgenic rice resulted in a semidwarf phenotype that could be fully rescued by applied GA”

✓ located verbatim in the source · abstract, characters 349–466 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

YAB1 overexpression increased GA(20).

Treatment
overexpressione0
Outcome
GA(20)e0
Direction
increasese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“increases of GA(20) and decreases of GA(1) levels in the overexpression plants”

✓ located verbatim in the source · abstract, characters 521–599 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 4–8 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

YAB1 overexpression decreased GA(1).

Treatment
overexpressione0
Outcome
GA(1) levelse0
Direction
decreasese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“increases of GA(20) and decreases of GA(1) levels in the overexpression plants”

✓ located verbatim in the source · abstract, characters 521–599 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 4–8 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

GA3ox2 transcripts decreased in YAB1 overexpression plants.

Treatment
overexpression plantse1
Gene
GA3ox2e0
Outcome
transcripts of the biosynthetic gene GA3ox2e0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the transcripts of the biosynthetic gene GA3ox2 were decreased”

✓ located verbatim in the source · abstract, characters 610–672 · show in text ↑
e1

“overexpression plants”

✓ located verbatim in the source · abstract, characters 578–599 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 4–8 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

YAB1 cosuppression induced GA3ox2 expression.

Treatment
Cosuppression of YAB1e0
Gene
GA3ox2e0
Outcome
expression of GA3ox2e0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Cosuppression of YAB1 in transgenic plants induced expression of GA3ox2”

✓ located verbatim in the source · abstract, characters 674–745 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 4–8 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Dexamethasone treatment repressed GA3ox2 in YAB1-glucocorticoid receptor plants.

Treatment
treatment by dexamethasonee0
Gene
GA3ox2e0
Outcome
GA3ox2e0
Direction
repressione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The repression of GA3ox2 could be obtained upon treatment by dexamethasone of transgenic plants expressing a YAB1-glucocorticoid receptor fusion”

✓ located verbatim in the source · abstract, characters 747–891 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 4–8 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

YAB1 bound a GA-responsive element in the GA3ox2 promoter.

Gene
YAB1e0
Outcome
bound to a GA-responsive element within the GA3ox2 promotere0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“YAB1 bound to a GA-responsive element within the GA3ox2 promoter”

✓ located verbatim in the source · abstract, characters 919–983 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 4–8 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

YAB1 expression was deregulated in GA biosynthesis and signaling mutants.

Material
GA biosynthesis and signaling mutantse0
Gene
YAB1e0
Outcome
expression of YAB1 was deregulatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the expression of YAB1 was deregulated in GA biosynthesis and signaling mutants”

✓ located verbatim in the source · abstract, characters 998–1077 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 4–8 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

GA transiently induced YAB1 expression.

Treatment
GAe0
Gene
YAB1e1
Outcome
expression of YAB1e1
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“transiently induced by GA”

✓ located verbatim in the source · abstract, characters 1098–1123 · show in text ↑
e1

“the expression of YAB1”

✓ located verbatim in the source · abstract, characters 998–1020 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 4–8 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

A GA inhibitor repressed YAB1 expression.

Treatment
GA inhibitore0
Gene
YAB1e1
Outcome
expression of YAB1e1
Direction
repressede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“repressed by a GA inhibitor”

✓ located verbatim in the source · abstract, characters 1127–1154 · show in text ↑
e1

“the expression of YAB1”

✓ located verbatim in the source · abstract, characters 998–1020 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 4–8 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

YAB1 overexpression impaired GA-mediated GA3ox2 repression.

Treatment
overexpressione0
Gene
GA3ox2e0
Outcome
GA-mediated repression of GA3ox2e0
Direction
impairede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“either overexpression or cosuppression of YAB1 impaired GA-mediated repression of GA3ox2”

✓ located verbatim in the source · abstract, characters 1165–1253 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 4–8 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

YAB1 cosuppression impaired GA-mediated GA3ox2 repression.

Treatment
cosuppression of YAB1e0
Gene
GA3ox2e0
Outcome
GA-mediated repression of GA3ox2e0
Direction
impairede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“either overexpression or cosuppression of YAB1 impaired GA-mediated repression of GA3ox2”

✓ located verbatim in the source · abstract, characters 1165–1253 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 4–8 · show in text ↑

Gibberellic acid · molecular: expression · Oryza sativa (rice)Positive and negative results

25 papers: 18 positive, 7 negative or no effect

17 papers in the same direction as this paper · 7 in the opposite direction

  1. no effect
  2. no effect
  3. no effect

21 papers more in this group

See all 25 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.