Paper · 2009 · Journal of General Virology

Roles and interactions of begomoviruses and satellite DNAs associated with okra leaf curl disease in Mali, West Africa

Tatsuya Kon; Maria R. Rojas; Issoufou K. Abdourhamane; et al.

10
claims
15
verbatim quotes
100
citations
3
research areas
—
Not open access

Abstract

Okra leaf curl disease (OLCD) is a major constraint on okra (Abelmoschus esculentus) production in West Africa. Two monopartite begomoviruses (okra virus-1 and okra virus-2), a betasatellite and a DNA1 satellite are associated with OLCD in Mali. Okra virus-1 is an isolate of okra yellow crinkle virus (OYCrV), okra virus-2 is a recombinant isolate of cotton leaf curl Gezira virus (CLCuGV) and the betasatellite is a variant of cotton leaf curl Gezira betasatellite (CLCuGB). Cloned DNA of OYCrV and CLCuGV were infectious and induced leaf curl symptoms in Nicotiana benthamiana plants, but did not induce OLCD in okra. However, when these clones were individually co-inoculated with the cloned CLCuGB DNA, symptom severity and viral DNA levels were increased in N. benthamiana plants and typical OLCD symptoms were induced in okra. The CLCuGB was also replicated by, and increased symptom severity of, three monopartite tomato-infecting begomoviruses, including two from West Africa. The sequence of the DNA1 satellite was highly divergent, indicating that it represents a distinct West African lineage. DNA1 replicated autonomously, and replication required the DNA1-encoded Rep protein. Although DNA1 reduced helper begomovirus DNA levels, symptoms were not attenuated. In the presence of CLCuGB, DNA levels of the helper begomoviruses and DNA1 were substantially increased. Together, these findings establish that OLCD in Mali is caused by a complex of monopartite begomoviruses and a promiscuous betasatellite with an associated parasitic DNA1 satellite. These findings are discussed in terms of the aetiology of OLCD and the evolution of new begomovirus/satellite DNA complexes.

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Claims 10

Associationobservedoriginal resultmeasured

Claim · model-written summary

Two begomoviruses and two satellites were associated with okra leaf curl disease in Mali.

Interactor
okra virus-1e0pathogen
Outcome
OLCDe0
Setting
Malie0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Abelmoschus esculentus
Abelmoschus esculentus · TaxonKristine Paulus from New York, United States · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“Two monopartite begomoviruses (okra virus-1 and okra virus-2), a betasatellite and a DNA1 satellite are associated with OLCD in Mali.”

✓ located verbatim in the source · abstract, characters 112–245 · show in text ↑
t0

“okra”

✓ located verbatim in the source · title, characters 75–79 · show in text ↑
Observationobservedoriginal resultmixedmeasured

Claim · model-written summary

The cloned viruses caused leaf curl in Nicotiana benthamiana but did not cause OLCD in okra.

Taxon
Nicotiana benthamianaNicotiana benthamianae0
Interactor
OYCrVe0pathogen
Outcome
leaf curl symptomse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cloned DNA of OYCrV and CLCuGV were infectious and induced leaf curl symptoms in Nicotiana benthamiana plants, but did not induce OLCD in okra.”

✓ located verbatim in the source · abstract, characters 477–620 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Co-inoculation with CLCuGB increased symptom severity in Nicotiana benthamiana.

Taxon
N. benthamianaNicotiana benthamianae0
Treatment
co-inoculated with the cloned CLCuGB DNAe0
Interactor
CLCuGBe0pathogen
Outcome
symptom severitye0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“when these clones were individually co-inoculated with the cloned CLCuGB DNA, symptom severity and viral DNA levels were increased in N. benthamiana plants”

✓ located verbatim in the source · abstract, characters 630–785 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Co-inoculation increased viral DNA levels in Nicotiana benthamiana.

Taxon
N. benthamianaNicotiana benthamianae0
Outcome
viral DNA levelse0
Direction
increasede0

Not reportedTreatmentComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“viral DNA levels were increased in N. benthamiana plants”

✓ located verbatim in the source · abstract, characters 729–785 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Co-inoculation induced typical OLCD symptoms in okra.

Outcome
typical OLCD symptomse0

Not reportedTreatmentComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Abelmoschus esculentus
Abelmoschus esculentus · TaxonKristine Paulus from New York, United States · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“typical OLCD symptoms were induced in okra.”

✓ located verbatim in the source · abstract, characters 790–833 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

CLCuGB replicated with three tomato-infecting begomoviruses and increased their symptom severity.

Interactor
tomato-infecting begomovirusese0pathogen
Outcome
symptom severitye0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The CLCuGB was also replicated by, and increased symptom severity of, three monopartite tomato-infecting begomoviruses, including two from West Africa.”

✓ located verbatim in the source · abstract, characters 834–985 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

DNA1 sequence indicated a distinct West African lineage.

Outcome
sequence of the DNA1 satellitee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Abelmoschus esculentus
Abelmoschus esculentus · TaxonKristine Paulus from New York, United States · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“The sequence of the DNA1 satellite was highly divergent, indicating that it represents a distinct West African lineage.”

✓ located verbatim in the source · abstract, characters 986–1105 · show in text ↑
t0

“okra”

✓ located verbatim in the source · title, characters 75–79 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

DNA1 replicated autonomously and required its encoded Rep protein.

Gene
DNA1-encoded Rep proteine0
Outcome
DNA1 replicated autonomouslye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Abelmoschus esculentus
Abelmoschus esculentus · TaxonKristine Paulus from New York, United States · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“DNA1 replicated autonomously, and replication required the DNA1-encoded Rep protein.”

✓ located verbatim in the source · abstract, characters 1106–1190 · show in text ↑
t0

“okra”

✓ located verbatim in the source · title, characters 75–79 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

DNA1 reduced helper begomovirus DNA levels without attenuating symptoms.

Outcome
helper begomovirus DNA levelse0
Direction
reducede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Abelmoschus esculentus
Abelmoschus esculentus · TaxonKristine Paulus from New York, United States · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“Although DNA1 reduced helper begomovirus DNA levels, symptoms were not attenuated.”

✓ located verbatim in the source · abstract, characters 1191–1273 · show in text ↑
t0

“okra”

✓ located verbatim in the source · title, characters 75–79 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

CLCuGB increased DNA levels of helper begomoviruses and DNA1.

Treatment
presence of CLCuGBe0
Outcome
DNA levels of the helper begomoviruses and DNA1e0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Abelmoschus esculentus
Abelmoschus esculentus · TaxonKristine Paulus from New York, United States · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“In the presence of CLCuGB, DNA levels of the helper begomoviruses and DNA1 were substantially increased.”

✓ located verbatim in the source · abstract, characters 1274–1378 · show in text ↑
t0

“okra”

✓ located verbatim in the source · title, characters 75–79 · show in text ↑

Gossypium hirsutum · disease · Nicotiana benthamianaPositive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. positive
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inoculation · disease · Nicotiana benthamianaPositive and negative results

40 papers: 8 positive, 32 negative or no effect

31 papers in the same direction as this paper · 8 in the opposite direction

  1. positive
  2. positive
  3. positive

36 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.