Paper · 1999 · Phytopathology

Transformation of Soil Microbial Community Structure and Rhizoctonia-Suppressive Potential in Response to Apple Roots

Mark Mazzola

14
claims
29
verbatim quotes
133
citations
1
research areas
—
Not open access

Abstract

ABSTRACT Changes in the composition of soil microbial communities and relative disease-suppressive ability of resident microflora in response to apple cultivation were assessed in orchard soils from a site possessing trees established for 1 to 5 years. The fungal community from roots of apple seedlings grown in noncultivated orchard soil was dominated by isolates from genera commonly considered saprophytic. Plant-pathogenic fungi in the genera Phytophthora, Pythium, and Rhizoctonia constituted an increasing proportion of the fungal community isolated from seedling roots with increasing orchard block age. Bacillus megaterium and Burkholderia cepacia dominated the bacterial communities recovered from noncultivated soil and the rhizosphere of apple seedlings grown in orchard soil, respectively. Populations of the two bacteria in their respective habitats declined dramatically with increasing orchard block age. Lesion nematode populations did not differ among soil and root samples from orchard blocks of different ages. Similar changes in microbial communities were observed in response to planting noncultivated orchard soil to five successive cycles of 'Gala' apple seedlings. Pasteurization of soil had no effect on apple growth in noncultivated soil but significantly enhanced apple growth in third-year orchard block soil. Seedlings grown in pasteurized soil from the third-year orchard block were equal in size to those grown in noncultivated soil, demonstrating that suppression of plant growth resulted from changes in the composition of the soil microbial community. Rhizoctonia solani anastomosis group 5 (AG 5) had no effect on growth of apple trees in noncultivated soil but significantly reduced the growth of apple trees in soil from third-year orchard soil. Changes in the ability of the resident soil microflora to suppress R. solani AG 5 were associated with reductions in the relative populations of Burkholderia cepacia and Pseudomonas putida in the rhizosphere of apple.

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Claims 14

Observationobservedoriginal resultmeasured

Claim · model-written summary

The fungal community from roots of apple seedlings grown in noncultivated orchard soil was dominated by genera commonly considered saprophytic.

Organ / stage
rootse0
Interactor
genera commonly considered saprophytice0other
Outcome
fungal communitye0
Setting
noncultivated orchard soile0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“The fungal community from roots of apple seedlings grown in noncultivated orchard soil was dominated by isolates from genera commonly considered saprophytic”

✓ located verbatim in the source · abstract, characters 253–409 · show in text ↑
t0

“Response to Apple Roots”

✓ located verbatim in the source · title, characters 94–117 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Plant-pathogenic fungi (Phytophthora, Pythium, Rhizoctonia) made up an increasing proportion of the root fungal community with increasing orchard block age.

Treatment
increasing orchard block agee0
Interactor
Phytophthora, Pythium, and RhizoctoniaPhytophthoraPythiumRhizoctoniae0pathogen
Outcome
proportion of the fungal communitye0
Direction
increasinge0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗
Phytophthora
Phytophthora · Interactor · picture of the genus (one of its species)Rasbak · CC BY-SA 3.0 · Wikimedia Commons ↗
Pythium
Pythium · Interactor · picture of the genus (one of its species)Doc. RNDr. Josef Reischig, CSc. · CC BY-SA 3.0 · Wikimedia Commons ↗
Rhizoctonia
Rhizoctonia · Interactor · picture from its Wikimedia Commons categoryTashkoskip · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Plant-pathogenic fungi in the genera Phytophthora, Pythium, and Rhizoctonia constituted an increasing proportion of the fungal community isolated from seedling roots with increasing orchard block age”

✓ located verbatim in the source · abstract, characters 411–610 · show in text ↑
t0

“Response to Apple Roots”

✓ located verbatim in the source · title, characters 94–117 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Bacillus megaterium dominated the bacterial communities recovered from noncultivated soil.

Interactor
Bacillus megateriumPriestia megateriume0other
Outcome
bacterial communitiese0
Setting
noncultivated soile0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗
Priestia megaterium
Priestia megaterium · InteractorOsmoregulator / Osmoregulator at English Wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Bacillus megaterium and Burkholderia cepacia dominated the bacterial communities recovered from noncultivated soil and the rhizosphere of apple seedlings grown in orchard soil, respectively”

✓ located verbatim in the source · abstract, characters 612–801 · show in text ↑
t0

“Response to Apple Roots”

✓ located verbatim in the source · title, characters 94–117 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Burkholderia cepacia dominated the bacterial communities in the rhizosphere of apple seedlings grown in orchard soil.

Interactor
Burkholderia cepaciaBurkholderia cepaciae0other
Outcome
bacterial communitiese0
Setting
rhizosphere of apple seedlings grown in orchard soile0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗
Burkholderia cepacia
Burkholderia cepacia · InteractorPhoto Credit: CDC/Janice Carr Content Providers: CDC/Janice Carr · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Bacillus megaterium and Burkholderia cepacia dominated the bacterial communities recovered from noncultivated soil and the rhizosphere of apple seedlings grown in orchard soil, respectively”

✓ located verbatim in the source · abstract, characters 612–801 · show in text ↑
t0

“Response to Apple Roots”

✓ located verbatim in the source · title, characters 94–117 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Populations of Bacillus megaterium and Burkholderia cepacia declined with increasing orchard block age.

Treatment
increasing orchard block agee0
Interactor
Bacillus megateriumPriestia megateriume1other
Second interactor
Burkholderia cepaciaBurkholderia cepaciae1other
Outcome
Populations of the two bacteriae0
Direction
declinede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗
Priestia megaterium
Priestia megaterium · InteractorOsmoregulator / Osmoregulator at English Wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗
Burkholderia cepacia
Burkholderia cepacia · Second interactorPhoto Credit: CDC/Janice Carr Content Providers: CDC/Janice Carr · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Populations of the two bacteria in their respective habitats declined dramatically with increasing orchard block age”

✓ located verbatim in the source · abstract, characters 803–919 · show in text ↑
e1

“Bacillus megaterium and Burkholderia cepacia dominated the bacterial communities recovered from noncultivated soil and the rhizosphere of apple seedlings grown in orchard soil, respectively”

✓ located verbatim in the source · abstract, characters 612–801 · show in text ↑
t0

“Response to Apple Roots”

✓ located verbatim in the source · title, characters 94–117 · show in text ↑
Associationobservedoriginal resultno effectmeasured

Claim · model-written summary

Lesion nematode populations did not differ among soil and root samples from orchard blocks of different ages.

Treatment
orchard blocks of different agese0
Interactor
Lesion nematodee0pest
Outcome
Lesion nematode populationse0
Direction
did not differe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“Lesion nematode populations did not differ among soil and root samples from orchard blocks of different ages”

✓ located verbatim in the source · abstract, characters 921–1029 · show in text ↑
t0

“Response to Apple Roots”

✓ located verbatim in the source · title, characters 94–117 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Microbial communities changed in noncultivated orchard soil after five successive cycles of Gala apple seedlings.

Material
Galae0
Treatment
five successive cyclese0
Outcome
microbial communitiese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“Similar changes in microbial communities were observed in response to planting noncultivated orchard soil to five successive cycles of 'Gala' apple seedlings”

✓ located verbatim in the source · abstract, characters 1031–1188 · show in text ↑
t0

“Response to Apple Roots”

✓ located verbatim in the source · title, characters 94–117 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Pasteurization of soil had no effect on apple growth in noncultivated soil.

Treatment
Pasteurization of soile0
Outcome
apple growthe0
Direction
had no effecte0
Setting
noncultivated soile0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“Pasteurization of soil had no effect on apple growth in noncultivated soil but significantly enhanced apple growth in third-year orchard block soil”

✓ located verbatim in the source · abstract, characters 1190–1337 · show in text ↑
t0

“Response to Apple Roots”

✓ located verbatim in the source · title, characters 94–117 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Pasteurization of soil significantly enhanced apple growth in third-year orchard block soil.

Treatment
Pasteurization of soile0
Outcome
apple growthe0
Direction
significantly enhancede0
Setting
third-year orchard block soile0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“Pasteurization of soil had no effect on apple growth in noncultivated soil but significantly enhanced apple growth in third-year orchard block soil”

✓ located verbatim in the source · abstract, characters 1190–1337 · show in text ↑
t0

“Response to Apple Roots”

✓ located verbatim in the source · title, characters 94–117 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Seedlings grown in pasteurized third-year orchard soil were equal in size to those grown in noncultivated soil.

Treatment
pasteurized soil from the third-year orchard blocke0
Outcome
sizee0
Direction
equale0
Comparator
noncultivated soile0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“Seedlings grown in pasteurized soil from the third-year orchard block were equal in size to those grown in noncultivated soil, demonstrating that suppression of plant growth resulted from changes in the composition of the soil microbial community”

✓ located verbatim in the source · abstract, characters 1339–1585 · show in text ↑
t0

“Response to Apple Roots”

✓ located verbatim in the source · title, characters 94–117 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Suppression of apple seedling growth is attributed to changes in the composition of the soil microbial community.

Outcome
suppression of plant growthe0
Qualifier
changes in the composition of the soil microbial communitye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“Seedlings grown in pasteurized soil from the third-year orchard block were equal in size to those grown in noncultivated soil, demonstrating that suppression of plant growth resulted from changes in the composition of the soil microbial community”

✓ located verbatim in the source · abstract, characters 1339–1585 · show in text ↑
t0

“Response to Apple Roots”

✓ located verbatim in the source · title, characters 94–117 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Rhizoctonia solani AG 5 had no effect on growth of apple trees in noncultivated soil.

Treatment
Rhizoctonia solani anastomosis group 5e0
Interactor
Rhizoctonia solani anastomosis group 5Rhizoctonia solanie0pathogen
Outcome
growth of apple treese0
Direction
had no effecte0
Setting
noncultivated soile0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗
Rhizoctonia solani
Rhizoctonia solani · Interactoranonimowy, niektóre prawa zastrzeżone (CC BY) · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“Rhizoctonia solani anastomosis group 5 (AG 5) had no effect on growth of apple trees in noncultivated soil but significantly reduced the growth of apple trees in soil from third-year orchard soil”

✓ located verbatim in the source · abstract, characters 1587–1782 · show in text ↑
t0

“Response to Apple Roots”

✓ located verbatim in the source · title, characters 94–117 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Rhizoctonia solani AG 5 significantly reduced the growth of apple trees in soil from third-year orchard soil.

Treatment
Rhizoctonia solani anastomosis group 5e0
Interactor
Rhizoctonia solani anastomosis group 5Rhizoctonia solanie0pathogen
Outcome
growth of apple treese0
Direction
significantly reducede0
Setting
soil from third-year orchard soile0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗
Rhizoctonia solani
Rhizoctonia solani · Interactoranonimowy, niektóre prawa zastrzeżone (CC BY) · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“Rhizoctonia solani anastomosis group 5 (AG 5) had no effect on growth of apple trees in noncultivated soil but significantly reduced the growth of apple trees in soil from third-year orchard soil”

✓ located verbatim in the source · abstract, characters 1587–1782 · show in text ↑
t0

“Response to Apple Roots”

✓ located verbatim in the source · title, characters 94–117 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Reductions in the relative populations of Burkholderia cepacia and Pseudomonas putida in the apple rhizosphere were associated with changes in soil microflora suppression of R. solani AG 5.

Interactor
Burkholderia cepaciaBurkholderia cepaciae0other
Second interactor
Pseudomonas putidaPseudomonas putidae0other
Outcome
relative populationse0
Direction
reductionse0
Setting
rhizosphere of applee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗
Burkholderia cepacia
Burkholderia cepacia · InteractorPhoto Credit: CDC/Janice Carr Content Providers: CDC/Janice Carr · Public domain · Wikimedia Commons ↗
Pseudomonas putida
Pseudomonas putida · Second interactorMroghair · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Changes in the ability of the resident soil microflora to suppress R. solani AG 5 were associated with reductions in the relative populations of Burkholderia cepacia and Pseudomonas putida in the rhizosphere of apple”

✓ located verbatim in the source · abstract, characters 1784–2000 · show in text ↑
t0

“Response to Apple Roots”

✓ located verbatim in the source · title, characters 94–117 · show in text ↑

processing · growth · Malus domestica (apple)Positive and negative results

20 papers: 13 positive, 7 negative or no effect

12 papers in the same direction as this paper · 6 in the opposite direction · 1 reporting no difference from an alternative

  1. positive
  2. negative
  3. negative

16 papers more in this group

See all 20 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.