Paper · 2006 · Plant Production Science

Effects of Anoxia on Amino Acid Levels in Rice Coleoptiles

Hisashi Kato-Noguchi; Chinatsu Ohashi

10
claims
17
verbatim quotes
12
citations
1
research areas
✓
Open access · cc-by

Abstract

Effects of anoxia on the levels of free-amino acids were investigated in the coleoptiles of rice (Oryza sativa L.) seedlings. Rice coleoptiles are able to grow in extremely low oxygen conditions. Anoxic stress increased the concentration of total free-amino acids in the coleoptiles. Alanine (Ala) and γ-aminobutyric acid (Gaba) were the main amino acids accumulated. After 48 h, Ala and Gaba concentrations in anoxic coleoptiles were 3.4- and 11.2-fold greater than those in non-stressed coleoptiles, respectively. Ala and Gaba represented 19 and 23 % of the amino acid pool in anoxic coleoptiles, respectively. Submergence stress also increased Ala and Gaba concentrations in rice coleoptiles. Since Ala and Gaba are bio-compatible solutes and their accumulation is known to stabilize osmotic potential and/or cytoplasmic pH in plant cells, these stress-induced amino acids may allow rice coleoptiles to make biochemical adjustment that enable them to cope with the stress conditions. Therefore, the ability to increase the concentrations of Ala and Gaba may be important for anoxic and submergence stress tolerance of rice seedlings.

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Claims 10

Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Rice coleoptiles can grow in extremely low oxygen.

Organ / stage
coleoptilese0
Outcome
grow in extremely low oxygen conditionse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Rice coleoptiles are able to grow in extremely low oxygen conditions”

✓ located verbatim in the source · abstract, characters 126–194 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Anoxic stress increased total free amino acids in rice coleoptiles.

Organ / stage
coleoptilese0
Treatment
Anoxic stresse0
Outcome
concentration of total free-amino acidse0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Anoxic stress increased the concentration of total free-amino acids in the coleoptiles”

✓ located verbatim in the source · abstract, characters 196–282 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 42–46 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Alanine was a main accumulated amino acid under anoxia.

Organ / stage
coleoptilest0
Outcome
Alanine (Ala)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Alanine (Ala) and γ-aminobutyric acid (Gaba) were the main amino acids accumulated”

✓ located verbatim in the source · abstract, characters 284–366 · show in text ↑
t0

“Rice Coleoptiles”

✓ located verbatim in the source · title, characters 42–58 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

GABA was a main accumulated amino acid under anoxia.

Organ / stage
coleoptilest0
Outcome
γ-aminobutyric acid (Gaba)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Alanine (Ala) and γ-aminobutyric acid (Gaba) were the main amino acids accumulated”

✓ located verbatim in the source · abstract, characters 284–366 · show in text ↑
t0

“Rice Coleoptiles”

✓ located verbatim in the source · title, characters 42–58 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

At 48 hours alanine in anoxic coleoptiles was 3.4-fold above non-stressed coleoptiles.

Treatment
anoxice0
Outcome
Alae0
Direction
greatere0
Value
3.4-e0
Qualifier
After 48 he0
Comparator
non-stressed coleoptilese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“After 48 h, Ala and Gaba concentrations in anoxic coleoptiles were 3.4- and 11.2-fold greater than those in non-stressed coleoptiles, respectively”

✓ located verbatim in the source · abstract, characters 368–514 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 42–46 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

At 48 hours GABA in anoxic coleoptiles was 11.2-fold above non-stressed coleoptiles.

Treatment
anoxice0
Outcome
Gabae0
Direction
greatere0
Value
11.2-folde0
Qualifier
After 48 he0
Comparator
non-stressed coleoptilese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“After 48 h, Ala and Gaba concentrations in anoxic coleoptiles were 3.4- and 11.2-fold greater than those in non-stressed coleoptiles, respectively”

✓ located verbatim in the source · abstract, characters 368–514 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 42–46 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Alanine comprised 19% of the amino acid pool in anoxic coleoptiles.

Organ / stage
coleoptilese0
Outcome
Alae0
Value
19e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Ala and Gaba represented 19 and 23 % of the amino acid pool in anoxic coleoptiles, respectively”

✓ located verbatim in the source · abstract, characters 516–611 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 42–46 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

GABA comprised 23% of the amino acid pool in anoxic coleoptiles.

Organ / stage
coleoptilese0
Outcome
Gabae0
Value
23 %e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Ala and Gaba represented 19 and 23 % of the amino acid pool in anoxic coleoptiles, respectively”

✓ located verbatim in the source · abstract, characters 516–611 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 42–46 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Submergence increased alanine in rice coleoptiles.

Treatment
Submergence stresse0
Outcome
Alae0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Submergence stress also increased Ala and Gaba concentrations in rice coleoptiles”

✓ located verbatim in the source · abstract, characters 613–694 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Submergence increased GABA in rice coleoptiles.

Treatment
Submergence stresse0
Outcome
Gabae0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Submergence stress also increased Ala and Gaba concentrations in rice coleoptiles”

✓ located verbatim in the source · abstract, characters 613–694 · show in text ↑

flooding · molecular: metabolites · Oryza sativa (rice)Positive and negative results

46 papers: 25 positive, 21 negative or no effect

24 papers in the same direction as this paper · 21 in the opposite direction

  1. positive
  2. no effect
  3. no effect

42 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.