Paper · 2009 · PLANT PHYSIOLOGY

Physiological and Transcriptome Analysis of Iron and Phosphorus Interaction in Rice Seedlings

Luqing Zheng; Fangliang Huang; Reena Narsai; et al.

8
claims
16
verbatim quotes
287
citations
2
research areas
✓
Open access

Abstract

The antagonistic interaction between iron (Fe) and phosphorus (P) has been noted in the area of plant nutrition. To understand the physiology and molecular mechanisms of this interaction, we studied the growth performance, nutrient concentration, and gene expression profiles of root and shoot segments derived from 10-d-old rice (Oryza sativa) seedlings under four different nutrient conditions: (1) full strength of Fe and P (+Fe+P); (2) full strength of P and no Fe (-Fe+P); (3) full strength of Fe and no P (+Fe-P); and (4) without both Fe and P (-Fe-P). While removal of Fe in the growth medium resulted in very low shoot and root Fe concentrations, the chlorotic symptoms and retarded seedling growth were only observed on seedlings grown in the presence of P. Microarray data showed that in roots, 7,628 transcripts were significantly changed in abundance in the absence of Fe alone. Interestingly, many of these changes were reversed if P was also absent (-Fe-P), with only approximately 15% overlapping with -Fe alone (-Fe+P). Analysis of the soluble Fe concentration in rice seedling shoots showed that P deficiency resulted in significantly increased Fe availability within the plants. The soluble Fe concentration under -Fe-P conditions was similar to that under +Fe+P conditions. These results provide evidence that the presence of P can affect Fe availability and in turn can influence the regulation of Fe-responsive genes.

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Claims 8

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Removing iron led to very low shoot and root iron concentration.

Taxon
rice (Oryza sativa)Oryza sativae1
Treatment
removal of Fee0
Outcome
shoot and root Fe concentrationse0
Direction
very lowe0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“removal of Fe in the growth medium resulted in very low shoot and root Fe concentrations”

✓ located verbatim in the source · abstract, characters 565–653 · show in text ↑
e1

“rice (Oryza sativa) seedlings”

✓ located verbatim in the source · abstract, characters 325–354 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Chlorosis and retarded growth after iron removal appeared only when phosphorus was present.

Taxon
rice (Oryza sativa)Oryza sativae1
Outcome
chlorotic symptoms and retarded seedling growthe0
Qualifier
presence of Pe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the chlorotic symptoms and retarded seedling growth were only observed on seedlings grown in the presence of P.”

✓ located verbatim in the source · abstract, characters 655–766 · show in text ↑
e1

“rice (Oryza sativa) seedlings”

✓ located verbatim in the source · abstract, characters 325–354 · show in text ↑
Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Iron deficiency alone significantly changed abundance of 7,628 root transcripts.

Taxon
rice (Oryza sativa)Oryza sativae1
Organ / stage
rootse0
Treatment
absence of Fe alonee0
Outcome
transcripts were significantly changed in abundancee0
Value
7,628 transcriptse0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“in roots, 7,628 transcripts were significantly changed in abundance in the absence of Fe alone.”

✓ located verbatim in the source · abstract, characters 795–890 · show in text ↑
e1

“rice (Oryza sativa) seedlings”

✓ located verbatim in the source · abstract, characters 325–354 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Many iron-responsive transcript changes reversed with concurrent phosphorus absence.

Taxon
rice (Oryza sativa)Oryza sativae1
Treatment
P was also absent (-Fe-P)e0
Outcome
these changese0
Direction
reversede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“many of these changes were reversed if P was also absent (-Fe-P)”

✓ located verbatim in the source · abstract, characters 906–970 · show in text ↑
e1

“rice (Oryza sativa) seedlings”

✓ located verbatim in the source · abstract, characters 325–354 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Only approximately 15% of transcript changes overlapped between combined deficiency and iron deficiency alone.

Taxon
rice (Oryza sativa)Oryza sativae1
Outcome
overlappinge0
Value
approximately 15%e0
Comparator
-Fe alone (-Fe+P)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“only approximately 15% overlapping with -Fe alone (-Fe+P).”

✓ located verbatim in the source · abstract, characters 977–1035 · show in text ↑
e1

“rice (Oryza sativa) seedlings”

✓ located verbatim in the source · abstract, characters 325–354 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Phosphorus deficiency significantly increased soluble iron availability in seedlings.

Taxon
rice (Oryza sativa)Oryza sativae1
Treatment
P deficiencye0
Outcome
Fe availabilitye0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“P deficiency resulted in significantly increased Fe availability within the plants.”

✓ located verbatim in the source · abstract, characters 1113–1196 · show in text ↑
e1

“rice (Oryza sativa) seedlings”

✓ located verbatim in the source · abstract, characters 325–354 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

Soluble iron under combined deficiency was similar to full iron and phosphorus supply.

Taxon
rice (Oryza sativa)Oryza sativae1
Outcome
soluble Fe concentratione0
Direction
similare0
Comparator
+Fe+P conditionse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The soluble Fe concentration under -Fe-P conditions was similar to that under +Fe+P conditions.”

✓ located verbatim in the source · abstract, characters 1197–1292 · show in text ↑
e1

“rice (Oryza sativa) seedlings”

✓ located verbatim in the source · abstract, characters 325–354 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Authors infer that phosphorus presence affects iron availability and regulation of iron-responsive genes.

Taxon
rice (Oryza sativa)Oryza sativae1
Gene
Fe-responsive genese0
Compound
Pe0
Outcome
Fe availabilitye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the presence of P can affect Fe availability and in turn can influence the regulation of Fe-responsive genes.”

✓ located verbatim in the source · abstract, characters 1329–1438 · show in text ↑
e1

“rice (Oryza sativa) seedlings”

✓ located verbatim in the source · abstract, characters 325–354 · show in text ↑

iron atom · nutrient: content · Oryza sativa (rice)Positive and negative results

89 papers: 64 positive, 25 negative or no effect

24 papers in the same direction as this paper · 64 in the opposite direction

  1. positive
  2. positive
  3. positive

85 papers more in this group

See all 89 papers →

phosphorus · nutrient: content · Oryza sativa (rice)Positive and negative results

168 papers: 142 positive, 26 negative or no effect

25 papers in the same direction as this paper · 142 in the opposite direction

This paper is about lacking the nutrient, so it counts the other way round here.

  1. positive
  2. positive
    Phosphate slag yielded the highest silicon uptake.

    Silicon sources for rice crop · 2004 · compared with Wollastonite and electric furnace silicates

    Opposite direction

  3. positive

164 papers more in this group

See all 168 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.