Paper · 2014 · GCB Bioenergy

More plant growth but less plant defence? First global gene expression data for plants grown in soil amended with biochar

Maud Viger; Robert D. Hancock; Franco Miglietta; et al.

11
claims
28
verbatim quotes
195
citations
5
research areas
✓
Open access

Abstract

Abstract Biochar is a carbon (C)‐rich solid formed when biomass is used to produce bioenergy. This ‘black carbon’ has been suggested as a solution to climate change, potentially reducing global anthropogenic emissions of greenhouse gases by 12%, as well as promoting increased crop growth. How biochar application to soil leads to better crop yields remains open to speculation. Using the model plant Arabidopsis and the crop plant lettuce ( Lactuca sativa L.), we found increased plant growth in both species following biochar application. Statistically significant increases for Arabidopsis in leaf area (130%), rosette diameter (61%) and root length (100%) were observed with similar findings in lettuce, where biochar application also increased leaf cell expansion. For the first time, global gene expression arrays were used on biochar‐treated plants, enabling us to identify the growth‐promoting plant hormones, brassinosteroid and auxin, and their signalling molecules, as key to this growth stimulation, with limited impacts on genes controlling photosynthesis. In addition, genes for cell wall loosening were promoted as were those for increased activity in membrane transporters for sugar, nutrients and aquaporins for better water and nutrient uptake and movement of sugars for metabolism in the plant. Positive growth effects were accompanied by down‐regulation of a large suite of plant defence genes, including the jasmonic acid biosynthetic pathway, defensins and most categories of secondary metabolites. Such genes are critical for plant protection against insect and pathogen attack, as well as defence against stresses including drought. We propose a conceptual model to explain these effects in this biochar type, hypothesizing a role for additional K + supply in biochar amended soils, leading to Ca 2+ and Reactive Oxygen Species ( ROS ) –mediated signalling underpinning growth and defence signalling responses.

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Claims 11

Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Biochar increased Arabidopsis leaf area by 130%.

Taxon
ArabidopsisArabidopsise0
Treatment
biochar applicatione1
Outcome
leaf areae0
Direction
increasese0
Value
130%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Statistically significant increases for Arabidopsis in leaf area (130%), rosette diameter (61%) and root length (100%) were observed”

✓ located verbatim in the source · abstract, characters 541–673 · show in text ↑
t0

“biochar”

✓ located verbatim in the source · title, characters 114–121 · show in text ↑
e1

“Using the model plant Arabidopsis and the crop plant lettuce ( Lactuca sativa L.), we found increased plant growth in both species following biochar application.”

✓ located verbatim in the source · abstract, characters 379–540 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Biochar increased Arabidopsis rosette diameter by 61%.

Taxon
ArabidopsisArabidopsise0
Treatment
biochar applicatione1
Outcome
rosette diametere0
Direction
increasese0
Value
61%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Statistically significant increases for Arabidopsis in leaf area (130%), rosette diameter (61%) and root length (100%) were observed”

✓ located verbatim in the source · abstract, characters 541–673 · show in text ↑
t0

“biochar”

✓ located verbatim in the source · title, characters 114–121 · show in text ↑
e1

“Using the model plant Arabidopsis and the crop plant lettuce ( Lactuca sativa L.), we found increased plant growth in both species following biochar application.”

✓ located verbatim in the source · abstract, characters 379–540 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Biochar increased Arabidopsis root length by 100%.

Taxon
ArabidopsisArabidopsise0
Treatment
biochar applicatione1
Outcome
root lengthe0
Direction
increasese0
Value
100%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Statistically significant increases for Arabidopsis in leaf area (130%), rosette diameter (61%) and root length (100%) were observed”

✓ located verbatim in the source · abstract, characters 541–673 · show in text ↑
t0

“biochar”

✓ located verbatim in the source · title, characters 114–121 · show in text ↑
e1

“Using the model plant Arabidopsis and the crop plant lettuce ( Lactuca sativa L.), we found increased plant growth in both species following biochar application.”

✓ located verbatim in the source · abstract, characters 379–540 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Biochar increased lettuce growth.

Taxon
lettuceLactuca sativat0
Treatment
biochar applicatione0
Outcome
plant growthe0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lactuca sativa
Lactuca sativa · Taxonen:User:Geographer · CC BY 1.0 · Wikimedia Commons ↗

Verbatim

e0

“we found increased plant growth in both species following biochar application”

✓ located verbatim in the source · abstract, characters 462–539 · show in text ↑
t0

“Using the model plant Arabidopsis and the crop plant lettuce ( Lactuca sativa L.)”

✓ located verbatim in the source · abstract, characters 379–460 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Biochar increased lettuce leaf cell expansion.

Taxon
lettuceLactuca sativat0
Treatment
biochar applicatione0
Outcome
leaf cell expansione0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lactuca sativa
Lactuca sativa · Taxonen:User:Geographer · CC BY 1.0 · Wikimedia Commons ↗

Verbatim

e0

“biochar application also increased leaf cell expansion”

✓ located verbatim in the source · abstract, characters 714–768 · show in text ↑
t0

“Using the model plant Arabidopsis and the crop plant lettuce ( Lactuca sativa L.)”

✓ located verbatim in the source · abstract, characters 379–460 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

Expression arrays implicated brassinosteroid and auxin signalling in biochar growth stimulation.

Taxon
ArabidopsisArabidopsist0
Compound
brassinosteroid and auxine0
Outcome
growth stimulatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“identify the growth‐promoting plant hormones, brassinosteroid and auxin, and their signalling molecules, as key to this growth stimulation”

✓ located verbatim in the source · abstract, characters 872–1010 · show in text ↑
t0

“Using the model plant Arabidopsis and the crop plant lettuce ( Lactuca sativa L.)”

✓ located verbatim in the source · abstract, characters 379–460 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Biochar had limited impact on photosynthesis genes.

Taxon
ArabidopsisArabidopsist0
Outcome
limited impacts on genes controlling photosynthesise0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“with limited impacts on genes controlling photosynthesis”

✓ located verbatim in the source · abstract, characters 1012–1068 · show in text ↑
t0

“Using the model plant Arabidopsis and the crop plant lettuce ( Lactuca sativa L.)”

✓ located verbatim in the source · abstract, characters 379–460 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Biochar promoted genes for cell wall loosening.

Taxon
ArabidopsisArabidopsist0
Treatment
biochar applicatione1
Outcome
genes for cell wall looseninge0
Direction
promotede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“genes for cell wall loosening were promoted”

✓ located verbatim in the source · abstract, characters 1083–1126 · show in text ↑
t0

“Using the model plant Arabidopsis and the crop plant lettuce ( Lactuca sativa L.)”

✓ located verbatim in the source · abstract, characters 379–460 · show in text ↑
e1

“Using the model plant Arabidopsis and the crop plant lettuce ( Lactuca sativa L.), we found increased plant growth in both species following biochar application.”

✓ located verbatim in the source · abstract, characters 379–540 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Biochar promoted genes for membrane transport of sugar, nutrients and water.

Taxon
ArabidopsisArabidopsist0
Treatment
biochar applicatione1
Outcome
activity in membrane transporters for sugar, nutrients and aquaporinse0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“increased activity in membrane transporters for sugar, nutrients and aquaporins for better water and nutrient uptake and movement of sugars for metabolism in the plant”

✓ located verbatim in the source · abstract, characters 1145–1312 · show in text ↑
t0

“Using the model plant Arabidopsis and the crop plant lettuce ( Lactuca sativa L.)”

✓ located verbatim in the source · abstract, characters 379–460 · show in text ↑
e1

“Using the model plant Arabidopsis and the crop plant lettuce ( Lactuca sativa L.), we found increased plant growth in both species following biochar application.”

✓ located verbatim in the source · abstract, characters 379–540 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Biochar down-regulated plant defence genes including jasmonic acid, defensin and secondary-metabolite pathways.

Taxon
ArabidopsisArabidopsist0
Treatment
biochar applicatione1
Outcome
plant defence genese0
Direction
down‐regulatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“down‐regulation of a large suite of plant defence genes, including the jasmonic acid biosynthetic pathway, defensins and most categories of secondary metabolites”

✓ located verbatim in the source · abstract, characters 1358–1519 · show in text ↑
t0

“Using the model plant Arabidopsis and the crop plant lettuce ( Lactuca sativa L.)”

✓ located verbatim in the source · abstract, characters 379–460 · show in text ↑
e1

“Using the model plant Arabidopsis and the crop plant lettuce ( Lactuca sativa L.), we found increased plant growth in both species following biochar application.”

✓ located verbatim in the source · abstract, characters 379–540 · show in text ↑
Mechanismhypothesisoriginal resultpositivemeasured

Claim · model-written summary

The authors hypothesize that extra K supply triggers Ca and ROS signalling behind growth and defence responses.

Taxon
ArabidopsisArabidopsist0
Compound
K +e0
Outcome
growth and defence signalling responsese0
Qualifier
Ca 2+ and Reactive Oxygen Species ( ROS ) –mediated signallinge0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“hypothesizing a role for additional K + supply in biochar amended soils, leading to Ca 2+ and Reactive Oxygen Species ( ROS ) –mediated signalling underpinning growth and defence signalling responses”

✓ located verbatim in the source · abstract, characters 1734–1933 · show in text ↑
t0

“Using the model plant Arabidopsis and the crop plant lettuce ( Lactuca sativa L.)”

✓ located verbatim in the source · abstract, characters 379–460 · show in text ↑

biochar · growth · Lactuca sativa (garden lettuce)Results differ

52 papers: 41 positive, 11 negative or no effect

40 papers in the same direction as this paper · 11 in the opposite direction

  1. positive
  2. positive
  3. positive

48 papers more in this group

See all 52 papers →

biochar · growth · ArabidopsisResults agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.