Paper · 2010 · PLANT PHYSIOLOGY

Identification of Arabidopsis Mutants Impaired in the Systemic Regulation of Root Nitrate Uptake by the Nitrogen Status of the Plant

Thomas Girin; El-Sayed El-Kafafi; Thomas Widiez; et al.

10
claims
20
verbatim quotes
57
citations
2
research areas
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Open access · other-oa

Abstract

Nitrate uptake by the roots is under systemic feedback repression by high nitrogen (N) status of the whole plant. The NRT2.1 gene, which encodes a NO(3)(-) transporter involved in high-affinity root uptake, is a major target of this N signaling mechanism. Using transgenic Arabidopsis (Arabidopsis thaliana) plants expressing the pNRT2.1::LUC reporter gene (NL line), we performed a genetic screen to isolate mutants altered in the NRT2.1 response to high N provision. Three hni (for high nitrogen insensitive) mutants belonging to three genetic loci and related to single and recessive mutations were selected. Compared to NL plants, these mutants display reduced down-regulation of both NRT2.1 expression and high-affinity NO(3)(-) influx under repressive conditions. Split-root experiments demonstrated that this is associated with an almost complete suppression of systemic repression of pNRT2.1 activity by high N status of the whole plant. Other mechanisms related to N and carbon nutrition regulating NRT2.1 or involved in the control of root SO(4)(-) uptake by the plant sulfur status are not or are slightly affected. The hni mutations did not lead to significant changes in total N and NO(3)(-) contents of the tissues, indicating that hni mutants are more likely regulatory mutants rather than assimilatory mutants. Nevertheless, hni mutations induce changes in amino acid, organic acid, and sugars pools, suggesting a possible role of these metabolites in the control of NO(3)(-) uptake by the plant N status. Altogether, our data indicate that the three hni mutants define a new class of N signaling mutants specifically impaired in the systemic feedback repression of root NO(3)(-) uptake.

Abstract from the paper’s OpenAlex record; open copy licensed other-oa. Read at the source ↗

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Claims 10

Observationobservedoriginal resultmeasured

Claim · model-written summary

Three recessive hni mutants at three genetic loci were selected.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianat0
Material
hni (for high nitrogen insensitive) mutantse0
Outcome
three genetic locie0
Value
Threee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Three hni (for high nitrogen insensitive) mutants belonging to three genetic loci and related to single and recessive mutations were selected.”

✓ located verbatim in the source · abstract, characters 469–611 · show in text ↑
t0

“Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 273–307 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

The hni mutants showed reduced down-regulation of NRT2.1 expression compared with NL plants under repressive conditions.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianat0
Material
these mutantse0
Treatment
repressive conditionse0
Gene
NRT2.1e0
Outcome
NRT2.1 expressione0
Direction
reduced down-regulatione0
Comparator
NL plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Compared to NL plants, these mutants display reduced down-regulation of both NRT2.1 expression and high-affinity NO(3)(-) influx under repressive conditions.”

✓ located verbatim in the source · abstract, characters 612–769 · show in text ↑
t0

“Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 273–307 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

The hni mutants showed reduced down-regulation of high-affinity nitrate influx compared with NL plants.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianat0
Material
these mutantse0
Treatment
repressive conditionse0
Outcome
high-affinity NO(3)(-) influxe0
Direction
reduced down-regulatione0
Comparator
NL plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Compared to NL plants, these mutants display reduced down-regulation of both NRT2.1 expression and high-affinity NO(3)(-) influx under repressive conditions.”

✓ located verbatim in the source · abstract, characters 612–769 · show in text ↑
t0

“Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 273–307 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

The hni phenotype was associated with almost complete suppression of systemic repression of pNRT2.1 activity under high whole-plant nitrogen status.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianat0
Treatment
high N status of the whole plante0
Gene
pNRT2.1e0
Outcome
systemic repression of pNRT2.1 activitye0
Direction
suppressione0
Qualifier
almost completee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Split-root experiments demonstrated that this is associated with an almost complete suppression of systemic repression of pNRT2.1 activity by high N status of the whole plant.”

✓ located verbatim in the source · abstract, characters 770–945 · show in text ↑
t0

“Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 273–307 · show in text ↑
Observationobservedoriginal resultmixedmeasured

Claim · model-written summary

Other nitrogen- and carbon-nutrition mechanisms regulating NRT2.1 were unaffected or slightly affected in the mutants.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianat0
Gene
NRT2.1e0
Outcome
Other mechanisms related to N and carbon nutrition regulating NRT2.1e0
Direction
not or are slightly affectede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Other mechanisms related to N and carbon nutrition regulating NRT2.1 or involved in the control of root SO(4)(-) uptake by the plant sulfur status are not or are slightly affected.”

✓ located verbatim in the source · abstract, characters 946–1126 · show in text ↑
t0

“Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 273–307 · show in text ↑
Observationobservedoriginal resultmixedmeasured

Claim · model-written summary

Control of root sulfate uptake by plant sulfur status was unaffected or slightly affected in the mutants.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianat0
Outcome
control of root SO(4)(-) uptake by the plant sulfur statuse0
Direction
not or are slightly affectede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Other mechanisms related to N and carbon nutrition regulating NRT2.1 or involved in the control of root SO(4)(-) uptake by the plant sulfur status are not or are slightly affected.”

✓ located verbatim in the source · abstract, characters 946–1126 · show in text ↑
t0

“Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 273–307 · show in text ↑
Intervention effectobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

The hni mutations did not significantly change tissue total nitrogen or nitrate content.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianat0
Material
hni mutantse0
Treatment
hni mutationse0
Outcome
total N and NO(3)(-) contents of the tissuese0
Direction
did not lead to significant changese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The hni mutations did not lead to significant changes in total N and NO(3)(-) contents of the tissues, indicating that hni mutants are more likely regulatory mutants rather than assimilatory mutants.”

✓ located verbatim in the source · abstract, characters 1127–1326 · show in text ↑
t0

“Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 273–307 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors interpret hni mutants as regulatory rather than assimilatory mutants.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianat0
Material
hni mutantse0
Outcome
regulatory mutants rather than assimilatory mutantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The hni mutations did not lead to significant changes in total N and NO(3)(-) contents of the tissues, indicating that hni mutants are more likely regulatory mutants rather than assimilatory mutants.”

✓ located verbatim in the source · abstract, characters 1127–1326 · show in text ↑
t0

“Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 273–307 · show in text ↑
Intervention effectobservedoriginal resultmixedmeasured

Claim · model-written summary

The hni mutations changed amino acid, organic acid, and sugar pools.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianat0
Treatment
hni mutationse0
Outcome
amino acid, organic acid, and sugars poolse0
Direction
changese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Nevertheless, hni mutations induce changes in amino acid, organic acid, and sugars pools, suggesting a possible role of these metabolites in the control of NO(3)(-) uptake by the plant N status.”

✓ located verbatim in the source · abstract, characters 1327–1521 · show in text ↑
t0

“Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 273–307 · show in text ↑
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

The authors suggest these metabolite pools may participate in nitrogen-status control of nitrate uptake.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianat0
Compound
these metabolitese0
Outcome
control of NO(3)(-) uptake by the plant N statuse0
Qualifier
possible rolee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Nevertheless, hni mutations induce changes in amino acid, organic acid, and sugars pools, suggesting a possible role of these metabolites in the control of NO(3)(-) uptake by the plant N status.”

✓ located verbatim in the source · abstract, characters 1327–1521 · show in text ↑
t0

“Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 273–307 · show in text ↑

loss of function · nutrient: content · Arabidopsis thaliana (thale cress)Positive and negative results

26 papers: 7 positive, 19 negative or no effect

18 papers in the same direction as this paper · 7 in the opposite direction

  1. no effect
  2. positive
  3. positive

22 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.