Paper · 2011 · New Phytologist

Differential expression and regulation of iron‐regulated metal transporters in Arabidopsis halleri and Arabidopsis thaliana – the role in zinc tolerance

Varanavasiappan Shanmugam; Jing‐Chi Lo; Chia‐Lin Wu; et al.

9
claims
10
verbatim quotes
138
citations
2
research areas
✓
Open access

Abstract

To avoid zinc (Zn) toxicity, plants have developed a Zn homeostasis mechanism to cope with Zn excess in the surrounding soil. In this report, we uncovered the difference of a cross-homeostasis system between iron (Fe) and Zn in dealing with Zn excess in the Zn hyperaccumulator Arabidopsis halleri ssp. gemmifera and nonhyperaccumulator Arabidopsis thaliana. Arabidopsis halleri shows low expression of the Fe acquisition and deficiency response-related genes IRT1 and IRT2 compared with A. thaliana. In A. thaliana, lowering the expression of IRT1 and IRT2 through the addition of excess Fe to the medium increases Zn tolerance. Excess Zn induces significant Fe deficiency in A. thaliana and reduces Fe accumulation in shoots. By contrast, the accumulation of Fe in shoots of A. halleri was stable under various Zn treatments. Root ferric chelate reductase (FRO) activity and expression of FIT are low in A. halleri compared with A. thaliana. Overexpressing a ZIP family member IRT3 in irt1-1, rescues the Fe-deficient phenotype. A fine-tuned Fe homeostasis mechanism in A. halleri maintains optimum Fe level by Zn-regulated ZIP transporters and prevents high Zn uptake through Fe-regulated metal transporters, and in part be responsible for Zn tolerance.

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Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

A. halleri has lower IRT1 and IRT2 expression than A. thaliana.

Taxon
Arabidopsis halleriArabidopsis hallerie0
Gene
IRT1 and IRT2e0
Outcome
low expressione0
Comparator
A. thalianae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis halleri
Arabidopsis halleri · TaxonHermannSchachner · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Arabidopsis halleri shows low expression of the Fe acquisition and deficiency response-related genes IRT1 and IRT2 compared with A. thaliana.”

✓ located verbatim in the source · abstract, characters 359–500 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Excess Fe lowered IRT1 and IRT2 expression and increased zinc tolerance in A. thaliana.

Taxon
A. thalianaArabidopsis thalianae0
Treatment
addition of excess Fee0
Gene
IRT1 and IRT2e0
Outcome
Zn tolerancee0
Direction
increasese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In A. thaliana, lowering the expression of IRT1 and IRT2 through the addition of excess Fe to the medium increases Zn tolerance.”

✓ located verbatim in the source · abstract, characters 501–629 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Excess zinc induced significant iron deficiency in A. thaliana.

Taxon
A. thalianaArabidopsis thalianae0
Treatment
Excess Zne0
Outcome
Fe deficiencye0
Direction
inducese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Excess Zn induces significant Fe deficiency in A. thaliana and reduces Fe accumulation in shoots.”

✓ located verbatim in the source · abstract, characters 630–727 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Excess zinc reduced shoot iron accumulation in A. thaliana.

Taxon
A. thalianaArabidopsis thalianae0
Treatment
Excess Zne0
Outcome
Fe accumulation in shootse0
Direction
reducese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Excess Zn induces significant Fe deficiency in A. thaliana and reduces Fe accumulation in shoots.”

✓ located verbatim in the source · abstract, characters 630–727 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Shoot iron accumulation in A. halleri was stable across zinc treatments.

Taxon
A. halleriArabidopsis hallerie0
Treatment
various Zn treatmentse0
Outcome
accumulation of Fe in shootse0
Direction
stablee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis halleri
Arabidopsis halleri · TaxonHermannSchachner · Public domain · Wikimedia Commons ↗

Verbatim

e0

“the accumulation of Fe in shoots of A. halleri was stable under various Zn treatments.”

✓ located verbatim in the source · abstract, characters 741–827 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

A. halleri had lower root FRO activity than A. thaliana.

Taxon
A. halleriArabidopsis hallerie0
Gene
ferric chelate reductase (FRO)e0
Outcome
Root ferric chelate reductase (FRO) activitye0
Direction
lowe0
Comparator
A. thalianae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis halleri
Arabidopsis halleri · TaxonHermannSchachner · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Root ferric chelate reductase (FRO) activity and expression of FIT are low in A. halleri compared with A. thaliana.”

✓ located verbatim in the source · abstract, characters 828–943 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

A. halleri had lower FIT expression than A. thaliana.

Taxon
A. halleriArabidopsis hallerie0
Gene
FITe0
Outcome
expression of FITe0
Direction
lowe0
Comparator
A. thalianae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis halleri
Arabidopsis halleri · TaxonHermannSchachner · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Root ferric chelate reductase (FRO) activity and expression of FIT are low in A. halleri compared with A. thaliana.”

✓ located verbatim in the source · abstract, characters 828–943 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

IRT3 overexpression rescued the iron deficient phenotype of irt1-1.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Material
irt1-1e0
Treatment
Overexpressing a ZIP family member IRT3e0
Gene
IRT3e0
Outcome
Fe-deficient phenotypee0
Direction
rescuese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Overexpressing a ZIP family member IRT3 in irt1-1, rescues the Fe-deficient phenotype.”

✓ located verbatim in the source · abstract, characters 944–1030 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 103–123 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The authors attribute zinc tolerance in A. halleri partly to regulated iron homeostasis and limited zinc uptake.

Taxon
A. halleriArabidopsis hallerie0
Gene
Zn-regulated ZIP transporterse0
Outcome
Zn tolerancee0
Qualifier
Fe homeostasis mechanisme0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis halleri
Arabidopsis halleri · TaxonHermannSchachner · Public domain · Wikimedia Commons ↗

Verbatim

e0

“A fine-tuned Fe homeostasis mechanism in A. halleri maintains optimum Fe level by Zn-regulated ZIP transporters and prevents high Zn uptake through Fe-regulated metal transporters, and in part be responsible for Zn tolerance.”

✓ located verbatim in the source · abstract, characters 1031–1256 · show in text ↑

zinc atom · nutrient: content · Arabidopsis thaliana (thale cress)Positive and negative results

3 papers: 2 positive, 1 negative or no effect

2 in the opposite direction

  1. positive
  2. positive
See all 3 papers →

iron atom · disease · Arabidopsis thaliana (thale cress)Results agree

4 papers: 4 positive, 0 negative or no effect

3 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive
See all 4 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.