Paper · 2015 · Applied and Environmental Microbiology

Genotype-Specific Variation in the Structure of Root Fungal Communities Is Related to Chickpea Plant Productivity

Navid Bazghaleh; Chantal Hamel; Yantai Gan; et al.

8
claims
12
verbatim quotes
55
citations
2
research areas
✓
Open access

Abstract

Increasing evidence supports the existence of variations in the association of plant roots with symbiotic fungi that can improve plant growth and inhibit pathogens. However, it is unclear whether intraspecific variations in the symbiosis exist among plant cultivars and if they can be used to improve crop productivity. In this study, we determined genotype-specific variations in the association of chickpea roots with soil fungal communities and evaluated the effect of root mycota on crop productivity. A 2-year field experiment was conducted in southwestern Saskatchewan, the central zone of the chickpea growing region of the Canadian prairie. The effects of 13 cultivars of chickpea, comprising a wide range of phenotypes and genotypes, were tested on the structure of root-associated fungal communities based on internal transcribed spacer (ITS) and 18S rRNA gene markers using 454 amplicon pyrosequencing. Chickpea cultivar significantly influenced the structure of the root fungal community. The magnitude of the effect varied with the genotypes evaluated, and effects were consistent across years. For example, the roots of CDC Corrine, CDC Cory, and CDC Anna hosted the highest fungal diversity and CDC Alma and CDC Xena the lowest. Fusarium sp. was dominant in chickpea roots but was less abundant in CDC Corrine than the other cultivars. A bioassay showed that certain of these fungal taxa, including Fusarium species, can reduce the productivity of chickpea, whereas Trichoderma harzianum can increase chickpea productivity. The large variation in the profile of chickpea root mycota, which included growth-promoting and -inhibiting species, supports the possibility of improving the productivity of chickpea by improving its root mycota in chickpea genetic improvement programs using traditional breeding techniques.

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Claims 8

Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Chickpea cultivar significantly influenced the structure of the root fungal community.

Taxon
chickpeaCicer arietinume1
Treatment
Chickpea cultivare1
Outcome
structure of the root fungal communitye1

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cicer arietinum
Cicer arietinum · TaxonSanjay Acharya · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Chickpea cultivar significantly influenced the structure of the root fungal community”

✓ located verbatim in the source · abstract, characters 914–999 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

The magnitude of the cultivar effect on root fungi varied with genotype but was consistent across years.

Taxon
chickpeaCicer arietinume1
Treatment
genotypes evaluatede2
Outcome
magnitude of the effecte2
Qualifier
consistent across yearse2

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cicer arietinum
Cicer arietinum · TaxonSanjay Acharya · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Chickpea cultivar significantly influenced the structure of the root fungal community”

✓ located verbatim in the source · abstract, characters 914–999 · show in text ↑
e2

“The magnitude of the effect varied with the genotypes evaluated, and effects were consistent across years”

✓ located verbatim in the source · abstract, characters 1001–1106 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The roots of CDC Corrine, CDC Cory and CDC Anna hosted the highest fungal diversity.

Taxon
chickpeaCicer arietinume1
Material
CDC Corrine, CDC Cory, and CDC Annae3
Organ / stage
rootse3
Outcome
fungal diversitye3
Direction
higheste3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cicer arietinum
Cicer arietinum · TaxonSanjay Acharya · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Chickpea cultivar significantly influenced the structure of the root fungal community”

✓ located verbatim in the source · abstract, characters 914–999 · show in text ↑
e3

“the roots of CDC Corrine, CDC Cory, and CDC Anna hosted the highest fungal diversity”

✓ located verbatim in the source · abstract, characters 1121–1205 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

CDC Alma and CDC Xena had the lowest fungal diversity in chickpea roots.

Taxon
chickpeaCicer arietinume1
Material
CDC Alma and CDC Xenae4
Outcome
fungal diversitye3
Direction
loweste4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cicer arietinum
Cicer arietinum · TaxonSanjay Acharya · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Chickpea cultivar significantly influenced the structure of the root fungal community”

✓ located verbatim in the source · abstract, characters 914–999 · show in text ↑
e3

“the roots of CDC Corrine, CDC Cory, and CDC Anna hosted the highest fungal diversity”

✓ located verbatim in the source · abstract, characters 1121–1205 · show in text ↑
e4

“CDC Alma and CDC Xena the lowest”

✓ located verbatim in the source · abstract, characters 1210–1242 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Fusarium sp. was dominant in chickpea roots but less abundant in CDC Corrine than in the other cultivars.

Taxon
chickpeaCicer arietinume5
Material
CDC Corrinee5
Organ / stage
rootse5
Interactor
Fusarium sp.Fusariume5pathogen
Outcome
abundante5
Direction
lesse5
Comparator
the other cultivarse5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cicer arietinum
Cicer arietinum · TaxonSanjay Acharya · CC BY-SA 3.0 · Wikimedia Commons ↗
Fusarium
Fusarium · Interactor · picture of the genus (one of its species)Public domain · Wikimedia Commons ↗

Verbatim

e5

“Fusarium sp. was dominant in chickpea roots but was less abundant in CDC Corrine than the other cultivars”

✓ located verbatim in the source · abstract, characters 1244–1349 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Certain root fungal taxa, including Fusarium species, reduced chickpea productivity in a bioassay.

Taxon
chickpeaCicer arietinume6
Treatment
certain of these fungal taxae6
Interactor
Fusarium speciesFusariume6pathogen
Outcome
productivity of chickpeae6
Direction
reducee6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cicer arietinum
Cicer arietinum · TaxonSanjay Acharya · CC BY-SA 3.0 · Wikimedia Commons ↗
Fusarium
Fusarium · Interactor · picture of the genus (one of its species)Public domain · Wikimedia Commons ↗

Verbatim

e6

“A bioassay showed that certain of these fungal taxa, including Fusarium species, can reduce the productivity of chickpea, whereas Trichoderma harzianum can increase chickpea productivity”

✓ located verbatim in the source · abstract, characters 1351–1537 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Trichoderma harzianum increased chickpea productivity in a bioassay.

Taxon
chickpeaCicer arietinume6
Treatment
Trichoderma harzianume6
Interactor
Trichoderma harzianumTrichoderma harzianume6other
Outcome
chickpea productivitye6
Direction
increasee6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cicer arietinum
Cicer arietinum · TaxonSanjay Acharya · CC BY-SA 3.0 · Wikimedia Commons ↗
Trichoderma harzianum
Trichoderma harzianum · InteractorUS Department of Agriculture, Agricultural Research Service, Systematic Botany and Mycology Laboratory, [1] · Public domain · Wikimedia Commons ↗

Verbatim

e6

“A bioassay showed that certain of these fungal taxa, including Fusarium species, can reduce the productivity of chickpea, whereas Trichoderma harzianum can increase chickpea productivity”

✓ located verbatim in the source · abstract, characters 1351–1537 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

Improving root mycota in chickpea genetic improvement programs may improve chickpea productivity.

Taxon
chickpeaCicer arietinume7
Treatment
improving its root mycotae7
Outcome
productivity of chickpeae7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cicer arietinum
Cicer arietinum · TaxonSanjay Acharya · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e7

“supports the possibility of improving the productivity of chickpea by improving its root mycota in chickpea genetic improvement programs using traditional breeding techniques”

✓ located verbatim in the source · abstract, characters 1656–1830 · show in text ↑

Trichoderma harzianum · yield · Cicer arietinum (chickpea)Results agree

25 papers: 25 positive, 0 negative or no effect

24 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

21 papers more in this group

See all 25 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.