Paper · 2006 · Journal of Virology

Identification of a Ribonucleoprotein Intermediate of Tomato Mosaic Virus RNA Replication Complex Formation

Keisuke Komoda; Natsuki Mawatari; Yuka Hagiwara-Komoda; et al.

6
claims
12
verbatim quotes
42
citations
1
research areas
✓
Open access

Abstract

The replication of eukaryotic positive-strand RNA virus genomes occurs in the membrane-bound RNA replication complexes. Previously, we found that the extract of evacuolated tobacco BY-2 protoplasts (BYL) is capable of supporting the translation and subsequent replication of the genomic RNAs of plant positive-strand RNA viruses, including Tomato mosaic virus (ToMV). Here, to dissect the process that precedes the formation of ToMV RNA replication complexes, we prepared membrane-depleted BYL (mdBYL), in which the membranes were removed by centrifugation. In mdBYL, ToMV RNA was translated to produce the 130-kDa and 180-kDa replication proteins, but the synthesis of any ToMV-related RNAs did not occur. When BYL membranes were added back to the ToMV RNA-translated mdBYL after the termination of translation with puromycin, ToMV RNA was replicated. Using a replication-competent ToMV derivative that encodes the FLAG-tagged 180-kDa replication protein, it was shown by affinity purification that a complex that contained the 130-kDa and 180-kDa proteins and ToMV genomic RNA was formed after translation in mdBYL. When the complex was mixed with BYL membranes, ToMV RNA was replicated, which suggests that this ribonucleoprotein complex is an intermediate of ToMV RNA replication complex formation. We have named this ribonucleoprotein complex the "pre-membrane-targeting complex." Our data suggest that the formation of the pre-membrane-targeting complex is coupled with the translation of ToMV RNA, while posttranslationally added exogenous 180-kDa protein and replication templates can contribute to replication and can be replicated, respectively. Based on these results, we discuss the mechanisms of ToMV RNA replication complex formation.

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Claims 6

Observationobservedoriginal resultmeasured

Claim · model-written summary

In membrane-depleted tobacco BY-2 protoplast extract, Tomato mosaic virus RNA was translated into the 130-kDa and 180-kDa replication proteins but no ToMV-related RNAs were synthesized.

Taxon
tobacco BY-2 protoplastse1
Interactor
ToMVe0pathogen
Outcome
synthesis of any ToMV-related RNAse0

Verbatim

e0

“In mdBYL, ToMV RNA was translated to produce the 130-kDa and 180-kDa replication proteins, but the synthesis of any ToMV-related RNAs did not occur”

✓ located verbatim in the source · abstract, characters 558–705 · show in text ↑
e1

“evacuolated tobacco BY-2 protoplasts”

✓ located verbatim in the source · abstract, characters 161–197 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Adding BYL membranes back to ToMV RNA-translated membrane-depleted extract after translation was stopped with puromycin allowed ToMV RNA replication.

Taxon
tobacco BY-2 protoplastse1
Treatment
BYL membranes were added backe0
Interactor
ToMVe0pathogen
Outcome
ToMV RNA was replicatede0

Not reportedComparatorDirection

Verbatim

e0

“When BYL membranes were added back to the ToMV RNA-translated mdBYL after the termination of translation with puromycin, ToMV RNA was replicated”

✓ located verbatim in the source · abstract, characters 707–851 · show in text ↑
e1

“evacuolated tobacco BY-2 protoplasts”

✓ located verbatim in the source · abstract, characters 161–197 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Affinity purification showed that a complex containing the 130-kDa and 180-kDa proteins and ToMV genomic RNA formed after translation in membrane-depleted extract.

Taxon
tobacco BY-2 protoplastse1
Interactor
ToMVe0pathogen
Outcome
complex that contained the 130-kDa and 180-kDa proteins and ToMV genomic RNAe0

Verbatim

e0

“it was shown by affinity purification that a complex that contained the 130-kDa and 180-kDa proteins and ToMV genomic RNA was formed after translation in mdBYL”

✓ located verbatim in the source · abstract, characters 957–1116 · show in text ↑
e1

“evacuolated tobacco BY-2 protoplasts”

✓ located verbatim in the source · abstract, characters 161–197 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The complex, when mixed with BYL membranes, supported ToMV RNA replication, which the authors take to indicate it is an intermediate of replication complex formation.

Taxon
tobacco BY-2 protoplastse1
Treatment
mixed with BYL membranese0
Interactor
ToMVe0pathogen
Outcome
ToMV RNA was replicatede0

Verbatim

e0

“When the complex was mixed with BYL membranes, ToMV RNA was replicated, which suggests that this ribonucleoprotein complex is an intermediate of ToMV RNA replication complex formation”

✓ located verbatim in the source · abstract, characters 1118–1301 · show in text ↑
e1

“evacuolated tobacco BY-2 protoplasts”

✓ located verbatim in the source · abstract, characters 161–197 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors suggest that formation of the pre-membrane-targeting complex is coupled with translation of ToMV RNA.

Taxon
tobacco BY-2 protoplastse1
Interactor
ToMVe0pathogen
Outcome
formation of the pre-membrane-targeting complexe0
Qualifier
coupled with the translation of ToMV RNAe0

Verbatim

e0

“Our data suggest that the formation of the pre-membrane-targeting complex is coupled with the translation of ToMV RNA”

✓ located verbatim in the source · abstract, characters 1386–1503 · show in text ↑
e1

“evacuolated tobacco BY-2 protoplasts”

✓ located verbatim in the source · abstract, characters 161–197 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Exogenous 180-kDa protein and replication templates added after translation can contribute to replication and can be replicated, respectively.

Taxon
tobacco BY-2 protoplastse1
Outcome
contribute to replicatione0

Verbatim

e0

“posttranslationally added exogenous 180-kDa protein and replication templates can contribute to replication and can be replicated, respectively”

✓ located verbatim in the source · abstract, characters 1511–1654 · show in text ↑
e1

“evacuolated tobacco BY-2 protoplasts”

✓ located verbatim in the source · abstract, characters 161–197 · show in text ↑