Paper · 2005 · The Plant Journal

Antisense repression reveals a crucial role of the plastidic 2‐oxoglutarate/malate translocator DiT1 at the interface between carbon and nitrogen metabolism

Jörg Schneidereit; Rainer E. Häusler; Gabi Fiene; et al.

8
claims
16
verbatim quotes
117
citations
2
research areas
✓
Open access

Abstract

Ammonia assimilation by the plastidic glutamine synthetase/glutamate synthase system requires 2-oxoglutarate (2-OG) as a carbon precursor. Plastids depend on 2-OG import from the cytosol. A plastidic dicarboxylate translocator 1-[2-OG/malate translocator (DiT1)] has been identified and its substrate specificity and kinetic constants have been analyzed in vitro. However, the role of DiT1 in intact plants and its significance for ammonia assimilation remained uncertain. Here, to study the role of DiT1 in intact plants, its expression was antisense-repressed in transgenic tobacco plants. This resulted in a reduced transport capacity for 2-OG across the plastid envelope membrane. In consequence, allocation of carbon precursors to amino acid synthesis was impaired, organic acids accumulated and protein content, photosynthetic capacity and sugar pools in leaves were strongly decreased. The phenotype was consistent with a role of DIT1 in both, primary ammonia assimilation and the re-assimilation of ammonia resulting from the photorespiratory carbon cycle. Unexpectedly, the in situ rate of nitrate reduction was extremely low in alpha-DiT1 leaves, although nitrate reductase (NR) expression and activity remained high. We hypothesize that this discrepancy between extractable NR activity and in situ nitrate reduction is due to substrate limitation of NR. These findings and the severe phenotype of the antisense plants point to a crucial role of DiT1 at the interface between carbon and nitrogen metabolism.

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Claims 8

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Antisense repression of DiT1 in tobacco reduced the transport capacity for 2-OG across the plastid envelope.

Treatment
antisense-repressede2
Gene
DiT1e2
Outcome
transport capacity for 2-OG across the plastid envelope membranee3
Direction
reducede3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e2

“Here, to study the role of DiT1 in intact plants, its expression was antisense-repressed in transgenic tobacco plants”

✓ located verbatim in the source · abstract, characters 473–590 · show in text ↑
e3

“This resulted in a reduced transport capacity for 2-OG across the plastid envelope membrane”

✓ located verbatim in the source · abstract, characters 592–683 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Antisense repression of DiT1 in tobacco impaired allocation of carbon precursors to amino acid synthesis.

Treatment
antisense-repressede2
Outcome
allocation of carbon precursors to amino acid synthesise4
Direction
impairede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e2

“Here, to study the role of DiT1 in intact plants, its expression was antisense-repressed in transgenic tobacco plants”

✓ located verbatim in the source · abstract, characters 473–590 · show in text ↑
e4

“In consequence, allocation of carbon precursors to amino acid synthesis was impaired, organic acids accumulated and protein content, photosynthetic capacity and sugar pools in leaves were strongly decreased”

✓ located verbatim in the source · abstract, characters 685–891 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Antisense repression of DiT1 in tobacco led to accumulation of organic acids.

Treatment
antisense-repressede2
Outcome
organic acidse4
Direction
accumulatede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e2

“Here, to study the role of DiT1 in intact plants, its expression was antisense-repressed in transgenic tobacco plants”

✓ located verbatim in the source · abstract, characters 473–590 · show in text ↑
e4

“In consequence, allocation of carbon precursors to amino acid synthesis was impaired, organic acids accumulated and protein content, photosynthetic capacity and sugar pools in leaves were strongly decreased”

✓ located verbatim in the source · abstract, characters 685–891 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Antisense repression of DiT1 in tobacco strongly decreased protein content, photosynthetic capacity and sugar pools in leaves.

Organ / stage
leavese4
Treatment
antisense-repressede2
Outcome
protein content, photosynthetic capacity and sugar poolse4
Direction
strongly decreasede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e2

“Here, to study the role of DiT1 in intact plants, its expression was antisense-repressed in transgenic tobacco plants”

✓ located verbatim in the source · abstract, characters 473–590 · show in text ↑
e4

“In consequence, allocation of carbon precursors to amino acid synthesis was impaired, organic acids accumulated and protein content, photosynthetic capacity and sugar pools in leaves were strongly decreased”

✓ located verbatim in the source · abstract, characters 685–891 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

The in situ rate of nitrate reduction was lower in alpha-DiT1 tobacco leaves.

Material
alpha-DiT1e5
Outcome
in situ rate of nitrate reductione5
Direction
lowerinferrede5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e2

“Here, to study the role of DiT1 in intact plants, its expression was antisense-repressed in transgenic tobacco plants”

✓ located verbatim in the source · abstract, characters 473–590 · show in text ↑
e5

“Unexpectedly, the in situ rate of nitrate reduction was extremely low in alpha-DiT1 leaves, although nitrate reductase (NR) expression and activity remained high”

✓ located verbatim in the source · abstract, characters 1065–1226 · show in text ↑
Associationobservedoriginal resultno effectmeasured

Claim · model-written summary

Nitrate reductase expression and activity remained unchanged in alpha-DiT1 tobacco leaves.

Material
alpha-DiT1e5
Gene
nitrate reductasee5
Outcome
nitrate reductase (NR) expression and activitye5
Direction
no_changeinferrede5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e2

“Here, to study the role of DiT1 in intact plants, its expression was antisense-repressed in transgenic tobacco plants”

✓ located verbatim in the source · abstract, characters 473–590 · show in text ↑
e5

“Unexpectedly, the in situ rate of nitrate reduction was extremely low in alpha-DiT1 leaves, although nitrate reductase (NR) expression and activity remained high”

✓ located verbatim in the source · abstract, characters 1065–1226 · show in text ↑
Mechanismhypothesisoriginal resultbasis n/a

Claim · model-written summary

The discrepancy between extractable NR activity and in situ nitrate reduction is hypothesized to be due to substrate limitation of NR.

Gene
NRe6
Outcome
discrepancy between extractable NR activity and in situ nitrate reductione6
Qualifier
substrate limitatione6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e2

“Here, to study the role of DiT1 in intact plants, its expression was antisense-repressed in transgenic tobacco plants”

✓ located verbatim in the source · abstract, characters 473–590 · show in text ↑
e6

“We hypothesize that this discrepancy between extractable NR activity and in situ nitrate reduction is due to substrate limitation of NR”

✓ located verbatim in the source · abstract, characters 1228–1363 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The phenotype of DiT1 antisense tobacco is consistent with a role of DIT1 in primary ammonia assimilation and re-assimilation of photorespiratory ammonia.

Gene
DIT1e7
Outcome
primary ammonia assimilatione7
Qualifier
the re-assimilation of ammonia resulting from the photorespiratory carbon cyclee7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e2

“Here, to study the role of DiT1 in intact plants, its expression was antisense-repressed in transgenic tobacco plants”

✓ located verbatim in the source · abstract, characters 473–590 · show in text ↑
e7

“The phenotype was consistent with a role of DIT1 in both, primary ammonia assimilation and the re-assimilation of ammonia resulting from the photorespiratory carbon cycle”

✓ located verbatim in the source · abstract, characters 893–1063 · show in text ↑

loss of function · molecular: metabolites · Nicotiana tabacum (tobacco)Positive and negative results

24 papers: 10 positive, 14 negative or no effect

13 papers in the same direction as this paper · 10 in the opposite direction

  1. negative
  2. positive
  3. positive

20 papers more in this group

See all 24 papers →

loss of function · physiology: photosynthesis · Nicotiana tabacum (tobacco)Results agree

10 papers: 0 positive, 10 negative or no effect

9 papers in the same direction as this paper

  1. negative
  2. negative
  3. negative

6 papers more in this group

See all 10 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.