Paper · 2015 · PLoS ONE

Analyzing the Expression Profile of AREB/ABF and DREB/CBF Genes under Drought and Salinity Stresses in Grape (Vitis vinifera L.)

Hana Zandkarimi; Ali Ebadi; Seyed Alireza Salami; et al.

11
claims
22
verbatim quotes
92
citations
3
research areas
✓
Open access · cc-by

Abstract

Expression patterns of four candidate AREB/ABF genes and four DREB/CBF genes were evaluated in leaf and root tissues of five grape varieties ('Qalati', 'Kaj Angoor', 'Sabz Angoor', 'Siahe Zarghan', 'Bidane Safid') with differential response to drought stress. Among the AREB/ABF genes, AREB1 and ABF2 showed up-regulation in response to drought stress in leaf and root tissues of all varieties while AREB2 and ABF1 showed down-regulation in both leaf and root tissues of the sensitive variety 'Bidane Sefid' in response to drought and salt stress. Among the DREB/CBF genes, CBF4 was the most responsive to drought stress in both leaf and root tissues. CBF2 and CBF3 showed up-regulation in all varieties in response to drought stress in leaf except in 'Bidane Sefid'. Under salinity stress, AREB2 and ABF2 showed up-regulation in response to the increasing level of salinity in the leaf tissues but in the root tissues ABF2 was up-regulated in response to increasing NaCl concentration while AREB2 was down-regulated. Therefore, it seems AREB2 has tissue-specific response to salinity stress. All CBF genes were up-regulated in response to salinity stress in the leaf and root tissues. Expression data suggested that CBF2 is more responsive to NaCl stress. Among all four promising and stress tolerant varieties 'Siah Zarghan' and 'Kaj Angoor' were more tolerant than 'Qalati' and 'Sabz Angoor' to drought and salinity.

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The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 11

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

AREB1 and ABF2 were up-regulated by drought stress in leaf and root tissues of all grape varieties.

Taxon
grapee0
Organ / stage
leaf and root tissuese1
Treatment
drought stresse1
Gene
AREB1 and ABF2e1
Outcome
Expression patternse0
Direction
up-regulatione1

Not reportedComparator

Verbatim

e0

“Expression patterns of four candidate AREB/ABF genes and four DREB/CBF genes were evaluated in leaf and root tissues of five grape varieties”

✓ located verbatim in the source · abstract, characters 0–140 · show in text ↑
e1

“AREB1 and ABF2 showed up-regulation in response to drought stress in leaf and root tissues of all varieties”

✓ located verbatim in the source · abstract, characters 286–393 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

AREB2 and ABF1 were down-regulated in leaf and root tissues of the sensitive grape variety 'Bidane Sefid' under drought and salt stress.

Taxon
grapee0
Material
Bidane Sefide1
Organ / stage
leaf and root tissuese1
Treatment
drought and salt stresse1
Gene
AREB2 and ABF1e1
Outcome
Expression patternse0
Direction
down-regulatione1

Not reportedComparator

Verbatim

e0

“Expression patterns of four candidate AREB/ABF genes and four DREB/CBF genes were evaluated in leaf and root tissues of five grape varieties”

✓ located verbatim in the source · abstract, characters 0–140 · show in text ↑
e1

“AREB2 and ABF1 showed down-regulation in both leaf and root tissues of the sensitive variety 'Bidane Sefid' in response to drought and salt stress”

✓ located verbatim in the source · abstract, characters 400–546 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

CBF4 was the most responsive DREB/CBF gene to drought stress in leaf and root tissues.

Taxon
grapee0
Organ / stage
leaf and root tissuese1
Treatment
drought stresse1
Gene
CBF4e1
Outcome
most responsivee1
Direction
most responsivee1

Not reportedComparator

Verbatim

e0

“Expression patterns of four candidate AREB/ABF genes and four DREB/CBF genes were evaluated in leaf and root tissues of five grape varieties”

✓ located verbatim in the source · abstract, characters 0–140 · show in text ↑
e1

“Among the DREB/CBF genes, CBF4 was the most responsive to drought stress in both leaf and root tissues”

✓ located verbatim in the source · abstract, characters 548–650 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

CBF2 and CBF3 were up-regulated by drought stress in leaf of all grape varieties except the sensitive variety Bidane Sefid.

Taxon
grapee0
Organ / stage
leafe1
Treatment
drought stresse1
Gene
CBF2 and CBF3e1
Outcome
Expression patternse0
Direction
up-regulatione1
Qualifier
except in 'Bidane Sefid'e1

Not reportedComparator

Verbatim

e0

“Expression patterns of four candidate AREB/ABF genes and four DREB/CBF genes were evaluated in leaf and root tissues of five grape varieties”

✓ located verbatim in the source · abstract, characters 0–140 · show in text ↑
e1

“CBF2 and CBF3 showed up-regulation in all varieties in response to drought stress in leaf except in 'Bidane Sefid'”

✓ located verbatim in the source · abstract, characters 652–766 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

AREB2 and ABF2 were up-regulated in leaf tissues under salinity stress.

Taxon
grapee0
Organ / stage
leaf tissuese1
Treatment
salinity stresse1
Gene
AREB2 and ABF2e1
Outcome
Expression patternse0
Direction
up-regulatione1

Not reportedComparator

Verbatim

e0

“Expression patterns of four candidate AREB/ABF genes and four DREB/CBF genes were evaluated in leaf and root tissues of five grape varieties”

✓ located verbatim in the source · abstract, characters 0–140 · show in text ↑
e1

“Under salinity stress, AREB2 and ABF2 showed up-regulation in response to the increasing level of salinity in the leaf tissues”

✓ located verbatim in the source · abstract, characters 768–894 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

ABF2 was up-regulated in root tissues in response to increasing NaCl concentration.

Taxon
grapee0
Organ / stage
root tissuese1
Treatment
increasing NaCl concentratione1
Gene
ABF2e1
Outcome
Expression patternse0
Direction
up-regulatede1

Not reportedComparator

Verbatim

e0

“Expression patterns of four candidate AREB/ABF genes and four DREB/CBF genes were evaluated in leaf and root tissues of five grape varieties”

✓ located verbatim in the source · abstract, characters 0–140 · show in text ↑
e1

“in the root tissues ABF2 was up-regulated in response to increasing NaCl concentration while AREB2 was down-regulated”

✓ located verbatim in the source · abstract, characters 899–1016 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

AREB2 was down-regulated in root tissues in response to increasing NaCl concentration.

Taxon
grapee0
Organ / stage
root tissuese1
Treatment
increasing NaCl concentratione1
Gene
AREB2e1
Outcome
Expression patternse0
Direction
down-regulatede1

Not reportedComparator

Verbatim

e0

“Expression patterns of four candidate AREB/ABF genes and four DREB/CBF genes were evaluated in leaf and root tissues of five grape varieties”

✓ located verbatim in the source · abstract, characters 0–140 · show in text ↑
e1

“in the root tissues ABF2 was up-regulated in response to increasing NaCl concentration while AREB2 was down-regulated”

✓ located verbatim in the source · abstract, characters 899–1016 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

All CBF genes were up-regulated by salinity stress in leaf and root tissues.

Taxon
grapee0
Organ / stage
leaf and root tissuese1
Treatment
salinity stresse1
Gene
CBF genese1
Outcome
Expression patternse0
Direction
up-regulatede1

Not reportedComparator

Verbatim

e0

“Expression patterns of four candidate AREB/ABF genes and four DREB/CBF genes were evaluated in leaf and root tissues of five grape varieties”

✓ located verbatim in the source · abstract, characters 0–140 · show in text ↑
e1

“All CBF genes were up-regulated in response to salinity stress in the leaf and root tissues”

✓ located verbatim in the source · abstract, characters 1093–1184 · show in text ↑
Intervention effectauthor interpretationoriginal resultmeasured

Claim · model-written summary

CBF2 appears more responsive than other CBF genes to NaCl stress.

Taxon
grapee0
Treatment
NaCl stresse1
Gene
CBF2e1
Outcome
more responsivee1
Direction
more responsivee1

Not reportedComparator

Verbatim

e0

“Expression patterns of four candidate AREB/ABF genes and four DREB/CBF genes were evaluated in leaf and root tissues of five grape varieties”

✓ located verbatim in the source · abstract, characters 0–140 · show in text ↑
e1

“Expression data suggested that CBF2 is more responsive to NaCl stress”

✓ located verbatim in the source · abstract, characters 1186–1255 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Grape variety Siah Zarghan was more tolerant to drought and salinity than Qalati.

Taxon
grapee0
Material
Siah Zarghane1
Treatment
drought and salinitye1
Outcome
more tolerante1
Direction
more tolerante1
Comparator
Qalatie1

Verbatim

e0

“Expression patterns of four candidate AREB/ABF genes and four DREB/CBF genes were evaluated in leaf and root tissues of five grape varieties”

✓ located verbatim in the source · abstract, characters 0–140 · show in text ↑
e1

“'Siah Zarghan' and 'Kaj Angoor' were more tolerant than 'Qalati' and 'Sabz Angoor' to drought and salinity”

✓ located verbatim in the source · abstract, characters 1312–1418 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Grape variety Kaj Angoor was more tolerant to drought and salinity than Sabz Angoor.

Taxon
grapee0
Material
Kaj Angoore1
Treatment
drought and salinitye1
Outcome
more tolerante1
Direction
more tolerante1
Comparator
Sabz Angoore1

Verbatim

e0

“Expression patterns of four candidate AREB/ABF genes and four DREB/CBF genes were evaluated in leaf and root tissues of five grape varieties”

✓ located verbatim in the source · abstract, characters 0–140 · show in text ↑
e1

“'Siah Zarghan' and 'Kaj Angoor' were more tolerant than 'Qalati' and 'Sabz Angoor' to drought and salinity”

✓ located verbatim in the source · abstract, characters 1312–1418 · show in text ↑

salinity · disease · VitisPositive and negative results

5 papers: 2 positive, 3 negative or no effect

1 paper in the same direction as this paper · 3 in the opposite direction

  1. negative
  2. negative
  3. negative

1 paper more in this group

See all 5 papers →

drought · disease · VitisPositive and negative results

12 papers: 7 positive, 5 negative or no effect

6 papers in the same direction as this paper · 5 in the opposite direction

  1. negative
  2. negative
  3. no effect

8 papers more in this group

See all 12 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.