Paper · 1999 · PLANT PHYSIOLOGY

Stress-Induced Legume Root Nodule Senescence. Physiological, Biochemical, and Structural Alterations

Manuel A. Matamoros; Lisa M. Baird; Pedro R. Escuredo; et al.

16
claims
28
verbatim quotes
200
citations
2
research areas
✓
Open access

Abstract

Nitrate-fed and dark-stressed bean (Phaseolus vulgaris) and pea (Pisum sativum) plants were used to study nodule senescence. In bean, 1 d of nitrate treatment caused a partially reversible decline in nitrogenase activity and an increase in O(2) diffusion resistance, but minimal changes in carbon metabolites, antioxidants, and other biochemical parameters, indicating that the initial decrease in nitrogenase activity was due to O(2) limitation. In pea, 1 d of dark treatment led to a 96% decline in nitrogenase activity and sucrose, indicating sugar deprivation as the primary cause of activity loss. In later stages of senescence (4 d of nitrate or 2-4 d of dark treatment), nodules showed accumulation of oxidized proteins and general ultrastructural deterioration. The major thiol tripeptides of untreated nodules were homoglutathione (72%) in bean and glutathione (89%) in pea. These predominant thiols declined by approximately 93% after 4 d of nitrate or dark treatment, but the loss of thiol content can be only ascribed in part to limited synthesis by gamma-glutamylcysteinyl, homoglutathione, and glutathione synthetases. Ascorbate peroxidase was immunolocalized primarily in the infected and parenchyma (inner cortex) nodule cells, with large decreases in senescent tissue. Ferritin was almost undetectable in untreated bean nodules, but accumulated in the plastids and amyloplasts of uninfected interstitial and parenchyma cells following 2 or 4 d of nitrate treatment, probably as a response to oxidative stress.

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Claims 16

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

In bean, one day of nitrate treatment caused a partially reversible decline in nitrogenase activity.

Taxon
Phaseolus vulgarisPhaseolus vulgarise0
Organ / stage
nodulee0
Treatment
1 d of nitrate treatmente0
Outcome
nitrogenase activitye0
Direction
declinee0
Qualifier
partially reversiblee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Nitrate-fed and dark-stressed bean (Phaseolus vulgaris) and pea (Pisum sativum) plants were used to study nodule senescence. In bean, 1 d of nitrate treatment caused a partially reversible decline in nitrogenase activity and an increase in O(2) diffusion resistance”

✓ located verbatim in the source · abstract, characters 0–265 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

In bean, one day of nitrate treatment caused an increase in O2 diffusion resistance.

Taxon
Phaseolus vulgarisPhaseolus vulgarise0
Organ / stage
nodulee0
Treatment
1 d of nitrate treatmente0
Outcome
O(2) diffusion resistancee0
Direction
increasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Nitrate-fed and dark-stressed bean (Phaseolus vulgaris) and pea (Pisum sativum) plants were used to study nodule senescence. In bean, 1 d of nitrate treatment caused a partially reversible decline in nitrogenase activity and an increase in O(2) diffusion resistance”

✓ located verbatim in the source · abstract, characters 0–265 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

In bean, one day of nitrate treatment caused minimal changes in carbon metabolites, antioxidants and other biochemical parameters.

Taxon
Phaseolus vulgarisPhaseolus vulgarise0
Treatment
1 d of nitrate treatmente0
Outcome
carbon metabolites, antioxidants, and other biochemical parameterse1
Direction
minimal changese1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Nitrate-fed and dark-stressed bean (Phaseolus vulgaris) and pea (Pisum sativum) plants were used to study nodule senescence. In bean, 1 d of nitrate treatment caused a partially reversible decline in nitrogenase activity and an increase in O(2) diffusion resistance”

✓ located verbatim in the source · abstract, characters 0–265 · show in text ↑
e1

“but minimal changes in carbon metabolites, antioxidants, and other biochemical parameters, indicating that the initial decrease in nitrogenase activity was due to O(2) limitation”

✓ located verbatim in the source · abstract, characters 267–445 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The initial decrease in bean nitrogenase activity under nitrate treatment is attributed to O2 limitation.

Taxon
Phaseolus vulgarisPhaseolus vulgarise0
Outcome
initial decrease in nitrogenase activitye1
Qualifier
O(2) limitatione1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Nitrate-fed and dark-stressed bean (Phaseolus vulgaris) and pea (Pisum sativum) plants were used to study nodule senescence. In bean, 1 d of nitrate treatment caused a partially reversible decline in nitrogenase activity and an increase in O(2) diffusion resistance”

✓ located verbatim in the source · abstract, characters 0–265 · show in text ↑
e1

“but minimal changes in carbon metabolites, antioxidants, and other biochemical parameters, indicating that the initial decrease in nitrogenase activity was due to O(2) limitation”

✓ located verbatim in the source · abstract, characters 267–445 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

In pea, one day of dark treatment caused a 96% decline in nitrogenase activity and sucrose.

Taxon
Pisum sativumLathyrus oleraceuse0
Treatment
1 d of dark treatmente2
Outcome
nitrogenase activity and sucrosee2
Direction
declinee2
Value
96%e2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Nitrate-fed and dark-stressed bean (Phaseolus vulgaris) and pea (Pisum sativum) plants were used to study nodule senescence. In bean, 1 d of nitrate treatment caused a partially reversible decline in nitrogenase activity and an increase in O(2) diffusion resistance”

✓ located verbatim in the source · abstract, characters 0–265 · show in text ↑
e2

“In pea, 1 d of dark treatment led to a 96% decline in nitrogenase activity and sucrose, indicating sugar deprivation as the primary cause of activity loss”

✓ located verbatim in the source · abstract, characters 447–601 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

In pea, the loss of nitrogenase activity is attributed to sugar deprivation.

Taxon
Pisum sativumLathyrus oleraceuse0
Outcome
activity losse2
Qualifier
sugar deprivatione2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Nitrate-fed and dark-stressed bean (Phaseolus vulgaris) and pea (Pisum sativum) plants were used to study nodule senescence. In bean, 1 d of nitrate treatment caused a partially reversible decline in nitrogenase activity and an increase in O(2) diffusion resistance”

✓ located verbatim in the source · abstract, characters 0–265 · show in text ↑
e2

“In pea, 1 d of dark treatment led to a 96% decline in nitrogenase activity and sucrose, indicating sugar deprivation as the primary cause of activity loss”

✓ located verbatim in the source · abstract, characters 447–601 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Nitrate or dark stress in later senescence stages led to accumulation of oxidized proteins and general ultrastructural deterioration in nodules of bean and pea.

Taxon
bean (Phaseolus vulgaris) and pea (Pisum sativum)Phaseolus vulgarisLathyrus oleraceuse0
Organ / stage
nodulese3
Treatment
4 d of nitrate or 2-4 d of dark treatmente3
Outcome
accumulation of oxidized proteins and general ultrastructural deterioratione3

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗
Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Nitrate-fed and dark-stressed bean (Phaseolus vulgaris) and pea (Pisum sativum) plants were used to study nodule senescence. In bean, 1 d of nitrate treatment caused a partially reversible decline in nitrogenase activity and an increase in O(2) diffusion resistance”

✓ located verbatim in the source · abstract, characters 0–265 · show in text ↑
e3

“In later stages of senescence (4 d of nitrate or 2-4 d of dark treatment), nodules showed accumulation of oxidized proteins and general ultrastructural deterioration”

✓ located verbatim in the source · abstract, characters 603–768 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Bean nodules untreated contained major thiol tripeptides, homoglutathione at 72 percent.

Taxon
Phaseolus vulgarisPhaseolus vulgarise0
Organ / stage
untreated nodulese4
Outcome
major thiol tripeptidese4
Value
72%e4
Qualifier
homoglutathionee4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Nitrate-fed and dark-stressed bean (Phaseolus vulgaris) and pea (Pisum sativum) plants were used to study nodule senescence. In bean, 1 d of nitrate treatment caused a partially reversible decline in nitrogenase activity and an increase in O(2) diffusion resistance”

✓ located verbatim in the source · abstract, characters 0–265 · show in text ↑
e4

“The major thiol tripeptides of untreated nodules were homoglutathione (72%) in bean and glutathione (89%) in pea”

✓ located verbatim in the source · abstract, characters 770–882 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Pea untreated nodules contained major thiol tripeptides, glutathione at 89 percent.

Taxon
Pisum sativumLathyrus oleraceuse0
Organ / stage
untreated nodulese4
Outcome
major thiol tripeptidese4
Value
89%e4
Qualifier
glutathionee4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Nitrate-fed and dark-stressed bean (Phaseolus vulgaris) and pea (Pisum sativum) plants were used to study nodule senescence. In bean, 1 d of nitrate treatment caused a partially reversible decline in nitrogenase activity and an increase in O(2) diffusion resistance”

✓ located verbatim in the source · abstract, characters 0–265 · show in text ↑
e4

“The major thiol tripeptides of untreated nodules were homoglutathione (72%) in bean and glutathione (89%) in pea”

✓ located verbatim in the source · abstract, characters 770–882 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Predominant thiols in bean and pea nodules declined by approximately 93 percent after 4 d of nitrate or dark treatment compared with untreated nodules.

Taxon
bean (Phaseolus vulgaris) and pea (Pisum sativum)Phaseolus vulgarisLathyrus oleraceuse0
Treatment
4 d of nitrate or dark treatmente5
Outcome
predominant thiolse5
Direction
declinede5
Value
approximately 93%e5
Comparator
untreated nodulese4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗
Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Nitrate-fed and dark-stressed bean (Phaseolus vulgaris) and pea (Pisum sativum) plants were used to study nodule senescence. In bean, 1 d of nitrate treatment caused a partially reversible decline in nitrogenase activity and an increase in O(2) diffusion resistance”

✓ located verbatim in the source · abstract, characters 0–265 · show in text ↑
e4

“The major thiol tripeptides of untreated nodules were homoglutathione (72%) in bean and glutathione (89%) in pea”

✓ located verbatim in the source · abstract, characters 770–882 · show in text ↑
e5

“These predominant thiols declined by approximately 93% after 4 d of nitrate or dark treatment, but the loss of thiol content can be only ascribed in part to limited synthesis by gamma-glutamylcysteinyl, homoglutathione, and glutathione synthetases”

✓ located verbatim in the source · abstract, characters 884–1131 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Loss of thiol content in bean and pea nodules is attributed in part to limited synthesis by thiol synthetases.

Taxon
bean (Phaseolus vulgaris) and pea (Pisum sativum)Phaseolus vulgarisLathyrus oleraceuse0
Gene
gamma-glutamylcysteinyl, homoglutathione, and glutathione synthetasese5
Outcome
loss of thiol contente5
Qualifier
limited synthesise5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗
Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Nitrate-fed and dark-stressed bean (Phaseolus vulgaris) and pea (Pisum sativum) plants were used to study nodule senescence. In bean, 1 d of nitrate treatment caused a partially reversible decline in nitrogenase activity and an increase in O(2) diffusion resistance”

✓ located verbatim in the source · abstract, characters 0–265 · show in text ↑
e5

“These predominant thiols declined by approximately 93% after 4 d of nitrate or dark treatment, but the loss of thiol content can be only ascribed in part to limited synthesis by gamma-glutamylcysteinyl, homoglutathione, and glutathione synthetases”

✓ located verbatim in the source · abstract, characters 884–1131 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Ascorbate peroxidase was immunolocalized primarily in infected and parenchyma nodule cells of bean and pea.

Taxon
bean (Phaseolus vulgaris) and pea (Pisum sativum)Phaseolus vulgarisLathyrus oleraceuse0
Organ / stage
infected and parenchyma (inner cortex) nodule cellse6
Gene
Ascorbate peroxidasee6
Outcome
immunolocalizede6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗
Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Nitrate-fed and dark-stressed bean (Phaseolus vulgaris) and pea (Pisum sativum) plants were used to study nodule senescence. In bean, 1 d of nitrate treatment caused a partially reversible decline in nitrogenase activity and an increase in O(2) diffusion resistance”

✓ located verbatim in the source · abstract, characters 0–265 · show in text ↑
e6

“Ascorbate peroxidase was immunolocalized primarily in the infected and parenchyma (inner cortex) nodule cells, with large decreases in senescent tissue”

✓ located verbatim in the source · abstract, characters 1133–1284 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Ascorbate peroxidase showed large decreases in senescent tissue of bean and pea nodules.

Taxon
bean (Phaseolus vulgaris) and pea (Pisum sativum)Phaseolus vulgarisLathyrus oleraceuse0
Organ / stage
senescent tissuee6
Gene
Ascorbate peroxidasee6
Outcome
Ascorbate peroxidasee6
Direction
large decreasese6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗
Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Nitrate-fed and dark-stressed bean (Phaseolus vulgaris) and pea (Pisum sativum) plants were used to study nodule senescence. In bean, 1 d of nitrate treatment caused a partially reversible decline in nitrogenase activity and an increase in O(2) diffusion resistance”

✓ located verbatim in the source · abstract, characters 0–265 · show in text ↑
e6

“Ascorbate peroxidase was immunolocalized primarily in the infected and parenchyma (inner cortex) nodule cells, with large decreases in senescent tissue”

✓ located verbatim in the source · abstract, characters 1133–1284 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Ferritin was almost undetectable in untreated bean nodules.

Taxon
beane7
Organ / stage
nodulese7
Outcome
Ferritine7
Qualifier
almost undetectablee7

Verbatim

e7

“Ferritin was almost undetectable in untreated bean nodules, but accumulated in the plastids and amyloplasts of uninfected interstitial and parenchyma cells following 2 or 4 d of nitrate treatment, probably as a response to oxidative stress”

✓ located verbatim in the source · abstract, characters 1286–1525 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Ferritin accumulated in plastids and amyloplasts of uninfected interstitial and parenchyma cells of bean nodules after 2 or 4 d of nitrate treatment.

Taxon
beane7
Organ / stage
uninfected interstitial and parenchyma cellse7
Treatment
2 or 4 d of nitrate treatmente7
Outcome
Ferritine7
Direction
accumulatede7
Comparator
untreated bean nodulese7

Verbatim

e7

“Ferritin was almost undetectable in untreated bean nodules, but accumulated in the plastids and amyloplasts of uninfected interstitial and parenchyma cells following 2 or 4 d of nitrate treatment, probably as a response to oxidative stress”

✓ located verbatim in the source · abstract, characters 1286–1525 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Ferritin accumulation in bean nodules is probably a response to oxidative stress.

Taxon
beane7
Outcome
Ferritine7
Qualifier
oxidative stresse7

Verbatim

e7

“Ferritin was almost undetectable in untreated bean nodules, but accumulated in the plastids and amyloplasts of uninfected interstitial and parenchyma cells following 2 or 4 d of nitrate treatment, probably as a response to oxidative stress”

✓ located verbatim in the source · abstract, characters 1286–1525 · show in text ↑

nitrogen · molecular: metabolites · Phaseolus vulgaris (common bean)Results differ

11 papers: 3 positive, 8 negative or no effect

7 papers in the same direction as this paper · 3 in the opposite direction

  1. positive
  2. positive
  3. positive

7 papers more in this group

See all 11 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.